Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_K01
(507 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 51 9e-08
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 47 2e-06
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 44 1e-05
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 42 4e-05
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 41 9e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 1e-04
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 41 1e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 4e-04
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 38 9e-04
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 37 0.002
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 32 0.057
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 31 0.075
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 30 0.23
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 29 0.53
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 6.5
SPAC17A2.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 6.5
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 25 6.5
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 25 8.6
SPBC19C2.06c |mug124||sequence orphan|Schizosaccharomyces pombe|... 25 8.6
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 51.2 bits (117), Expect = 9e-08
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHP--NYH 363
++ KVA+VTG++ GIG+ L ++ VYL R+EE+ +K + ++ E H +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARK-GAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 364 QLDITDRKSVETFRDYIKNKYDGIDILVNNAAI 462
+LD+ D +SV + K + + ILVNNA I
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 46.8 bits (106), Expect = 2e-06
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 193 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNK-ENIHPNYH-- 363
++KV + G N+GIG +V+ L R V+ ++R E A +L + HPN
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPE----AATELQEWSKSHPNVKTV 59
Query: 364 QLDITDRKSVETFRDYIKNKYDGIDILVNNAAI 462
+LD+T ++S + DGID+L N+ I
Sbjct: 60 ELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQL 369
+ K ++TG + GIGF I + V L R+++ A +K + +
Sbjct: 7 LKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 370 DITDRKSV-ETFRDYIKNKYDGIDILVNNAAIAFKHNSTE 486
I +R +V ET ++ +D+++ NA IA H S E
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLE 106
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 42.3 bits (95), Expect = 4e-05
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = +1
Query: 193 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQLD 372
++K+ + G N+GIG +V+ L R VV+ ++R K + + +K + + + +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATK-LQEWSKSHSNVHIIKLD 62
Query: 373 ITDRKSVETFRDYIKNKYDGIDILVNNAAI 462
++ +S + D +D+L N+A+
Sbjct: 63 VSSLESANEAAQEVTKVVDAVDVLWVNSAV 92
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 41.1 bits (92), Expect = 9e-05
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVV--YLTSRDEERGRKAVADLNKENIHPNYH 363
+ K VV GA KGIGF I + V+ YLT+ E+ +K +A+ +H
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK-LAEETGVQVHT--L 75
Query: 364 QLDITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHN 477
++DI+ +VE + I+ + I ++V NA + F+ +
Sbjct: 76 KIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRS 113
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 40.7 bits (91), Expect = 1e-04
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +1
Query: 208 VVTGANKGIGFGIVR-GLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQLDITDR 384
++TG++KG+G+ +V+ GL + ++ V SR A + E+ +LD+TD
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYN--VIACSR-------APDTITIEHSKLLKLKLDVTDV 59
Query: 385 KSVET-FRDYIKNKYDGIDILVNNA 456
KSVET F+D K ++ +DI++NNA
Sbjct: 60 KSVETAFKD-AKRRFGNVDIVINNA 83
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 40.7 bits (91), Expect = 1e-04
Identities = 23/96 (23%), Positives = 48/96 (50%)
Frame = +1
Query: 193 SSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQLD 372
++K+ + G N+GIG +V+ L R VV+ ++R E + + + +K + + + +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATE-LQEWSKSHSNVHIIKLD 62
Query: 373 ITDRKSVETFRDYIKNKYDGIDILVNNAAIAFKHNS 480
I+ +S + +D+L N+ I N+
Sbjct: 63 ISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNT 98
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 39.1 bits (87), Expect = 4e-04
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADL-NKENIHPNYHQ 366
+ K ++TGA+ GIG + K + L +R + +L +K + +
Sbjct: 4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLK 63
Query: 367 LDITDRKSVETFRDYIKNKYDGIDILVNNAAIA 465
LD++D KS+ + + ++ ID+L+NNA +A
Sbjct: 64 LDVSDLKSIPGVIESLPKEFADIDVLINNAGLA 96
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 37.9 bits (84), Expect = 9e-04
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 202 VAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQLDITD 381
V V+ G N+GIG +V+ L + +GV S + D +K + + + +LD+T
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNK-EGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTS 66
Query: 382 RKSVETFRDYIKNKYDGIDILVNNAAIA 465
+S + ++ ID+L N+ I+
Sbjct: 67 LRSAKDAAMQVEKVVKCIDVLWVNSGIS 94
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Frame = +1
Query: 199 KVAVVTGANKGIGFGIVRGLCKRFDG---------VVYLTSRDEERGRKAVADLNK---- 339
K A++TG+N G+GFGI L + + V LT R E+ A L +
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 340 ENIHPNYHQLDITDRKSVETFRDYIKNKYDGIDILVNNA 456
I Y LD+++ SVE I ++ +D + NA
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNA 103
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 31.9 bits (69), Expect = 0.057
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDG--VVYLTSRDEERGRKAVADLNKENIHPNYH 363
+ K AVV G +GIG I + +VY T+ E + K +A N +
Sbjct: 19 LKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGE-KAAKEIAQAN--GVKTYTC 75
Query: 364 QLDITDRKSVETFRDYIKNKYDGIDILVNNAAI 462
+ D+T K VE I+ +D IDI+V N I
Sbjct: 76 KCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGI 108
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 31.5 bits (68), Expect = 0.075
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADLNKENIHPNYHQL 369
+ +V ++TGA GIG + LCK F T + + D +K Q
Sbjct: 3 VEGRVVLITGAAGGIG----KVLCKMF------TELGDRVAGIDIVDPSKVQDAALALQA 52
Query: 370 DITDRKSVETFRDYIKNKYDGIDILVNNAAIA 465
D++ +ET + + ID+L+NNA +A
Sbjct: 53 DVSKADQIETAIEKVIQTLGPIDVLINNAGLA 84
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 29.9 bits (64), Expect = 0.23
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 321 CFPSTFFVA*SQINNSIETLAKSSYYTESNAFIGSSNNSYL*RHYRL 181
CFP V + + N L K + + + N +GS N L R YRL
Sbjct: 604 CFPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRL 650
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 0.53
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 TSRD-EERGRKAVADLNKENIHPNYHQLDITDRKSVETFRDYIKNKYDGIDILVNNAAIA 465
T RD ++R + +AD+ EN+ ++H I D E F I+ + L N I
Sbjct: 131 TQRDIQQRTQDELADIGLENVPISFHLTSIFDHSIFEAFSRVIQKLIPQLPTLENLLNIF 190
Query: 466 FKHNSTEPA 492
++ E A
Sbjct: 191 CSNSLVEKA 199
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 25.0 bits (52), Expect = 6.5
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +1
Query: 190 MSSKVAVVTGANKGIGFGIVRGLCKRFDGVVYLTSRDEERGRKAVADL-NKENIHPNYHQ 366
++ K ++TG + GIG + +V +E + DL +E + +
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWE 99
Query: 367 LDITDRKSVETFRDYIKNKYDGIDILVNNAA 459
+ + D+ K ID+LVNN A
Sbjct: 100 GKLDKSDNCRDLVDFALKKLGWIDVLVNNIA 130
>SPAC17A2.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 69
Score = 25.0 bits (52), Expect = 6.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 131 RTIHFFHCFLPHC 169
+ ++F H FLPHC
Sbjct: 51 KRLNFLHAFLPHC 63
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 193 SSKVAVVTGANKGIGFGIVRGLCKR 267
+ KV ++TG++KGIG L K+
Sbjct: 5 AEKVILLTGSSKGIGLATAEALQKK 29
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 399 CFDTFPVSDVQLVVIG 352
C D+FP SDV+ +V G
Sbjct: 201 CVDSFPTSDVRSLVAG 216
>SPBC19C2.06c |mug124||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 24.6 bits (51), Expect = 8.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 231 HWIRYSKRTLQAFRWSC 281
HWI +S + F WSC
Sbjct: 83 HWIAFSCSVMCHFAWSC 99
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,838,474
Number of Sequences: 5004
Number of extensions: 34271
Number of successful extensions: 145
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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