Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J21
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5754E Cluster: PREDICTED: similar to neuron nav...    61   2e-08
UniRef50_Q7KT31 Cluster: CG33316-PA, isoform A; n=3; Drosophila ...    52   8e-06
UniRef50_Q8RHH0 Cluster: Putative uncharacterized protein FN2064...    34   2.2  
UniRef50_Q60DG1 Cluster: Putative uncharacterized protein B1110B...    34   2.2  
UniRef50_UPI0000DB6ED2 Cluster: PREDICTED: similar to CG33316-PA...    33   6.7  
UniRef50_UPI0000DADEB4 Cluster: transcriptional regulator, LuxR ...    33   6.7  
UniRef50_Q1N457 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A6W063 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_UPI0000D5754E Cluster: PREDICTED: similar to neuron
            navigator 2 isoform 2; n=1; Tribolium castaneum|Rep:
            PREDICTED: similar to neuron navigator 2 isoform 2 -
            Tribolium castaneum
          Length = 1925

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 45/112 (40%), Positives = 53/112 (47%)
 Frame = +2

Query: 260  RSTKSEKLYPSMLQRSSESDYEPYYCLPVQYGPTGQGLNYGVXXXXXXXXXXXXXXTHQP 439
            RSTKSEKLYPSML R++E + EPYYCLP+  G      +                 TH  
Sbjct: 1123 RSTKSEKLYPSMLHRNTEPETEPYYCLPI--GALSH-WSQPTSPAPGNARTFPLSPTHS- 1178

Query: 440  GNAMHTPRHSHHYPKKNDDVHXXXXXXXXXXXXXXXXXXXDERPAHEVRKLR 595
                 TPRHS   P KNDDVH                   +E+ AHE+RKLR
Sbjct: 1179 ----STPRHS--IP-KNDDVH--GSSISLVSTASSLYSSAEEKQAHEIRKLR 1221



 Score = 41.1 bits (92), Expect = 0.019
 Identities = 22/46 (47%), Positives = 25/46 (54%)
 Frame = +2

Query: 137  DRDKITPRGGMKISDGSLSDTQTYSEVKSDYGIPYAPWLRHRSTKS 274
            D   +  +G  K SDGSLSDTQ           PYAPWLRH +T S
Sbjct: 1039 DYGLVLRQGRPKASDGSLSDTQAIENTS-----PYAPWLRHSNTYS 1079


>UniRef50_Q7KT31 Cluster: CG33316-PA, isoform A; n=3; Drosophila
            melanogaster|Rep: CG33316-PA, isoform A - Drosophila
            melanogaster (Fruit fly)
          Length = 1249

 Score = 52.4 bits (120), Expect = 8e-06
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +2

Query: 260  RSTKSEKLYPSMLQRSSESDYEPYYCLPV 346
            RSTKSEK+YPSM+ R+ E + EPYYCLPV
Sbjct: 1043 RSTKSEKMYPSMMSRAGEVEIEPYYCLPV 1071



 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = +2

Query: 146  KITPRGGMKISDGSLSDTQTYSEVKSDYGIPYAPWLRHRSTKSEKL 283
            +I+ RGG +  DGSLSDTQTY+EVK +Y   YA WL+H +T   +L
Sbjct: 942  RISNRGGTR-HDGSLSDTQTYAEVKPEYS-SYAMWLKHSNTAGSRL 985


>UniRef50_Q8RHH0 Cluster: Putative uncharacterized protein FN2064;
           n=3; Fusobacterium nucleatum|Rep: Putative
           uncharacterized protein FN2064 - Fusobacterium nucleatum
           subsp. nucleatum
          Length = 167

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -2

Query: 422 LKLISETATVVLIHHNLDLVLLVHTVLANNNKVRNRFR 309
           LKL  E A+   IH  L+L L     L NNNKVRNR +
Sbjct: 14  LKLTGEYASANRIHDVLNLSLSFTYTLVNNNKVRNRVK 51


>UniRef50_Q60DG1 Cluster: Putative uncharacterized protein
           B1110B01.8; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           B1110B01.8 - Oryza sativa subsp. japonica (Rice)
          Length = 74

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 590 VSVPHALVFHPFRHQQQVTXPSKPEMPWNHARR 492
           + VP A++ HP  H    T PSKP  PW H  R
Sbjct: 20  IQVPAAVLPHPAPHHH-TTPPSKPSPPWAHPHR 51


>UniRef50_UPI0000DB6ED2 Cluster: PREDICTED: similar to CG33316-PA,
            isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to
            CG33316-PA, isoform A - Apis mellifera
          Length = 1614

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +2

Query: 185  SLSDTQTYSEVKSDYGIPYAPWLRH----RSTKSEKLYPSMLQRSS 310
            SL+  +     +   G P  P L      RSTKSEK+YPSML R S
Sbjct: 1499 SLTHARLLIHQRDSTGSPAPPRLNRSNSIRSTKSEKMYPSMLVRGS 1544


>UniRef50_UPI0000DADEB4 Cluster: transcriptional regulator, LuxR
           family; n=1; Coxiella burnetii Dugway 7E9-12|Rep:
           transcriptional regulator, LuxR family - Coxiella
           burnetii Dugway 7E9-12
          Length = 226

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +3

Query: 135 WIGTKSPLEEE*RSVTEAYQILKRIPRSNRITVYRTRRG*DIGQLNPKSCIRLCYKGLPK 314
           W+GTKSP+ +    V   +   K + RS  I +Y   +  +I +  P+  +++C   LP 
Sbjct: 92  WLGTKSPIIDN-DLVIGVFCSFKNVTRSPLINLYNILQPVNITKSKPQLTLKICDYSLPV 150

Query: 315 AITNL 329
            ++ +
Sbjct: 151 QLSKI 155


>UniRef50_Q1N457 Cluster: Putative uncharacterized protein; n=1;
           Oceanobacter sp. RED65|Rep: Putative uncharacterized
           protein - Oceanobacter sp. RED65
          Length = 162

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 597 LLSFRTSCAGLSSVPAPAASDEXVETRDAVEPCTSSFFFG 478
           LL F  SC+G++S+  P + +E  E R    P   S  FG
Sbjct: 9   LLIFLCSCSGIASISQPPSDEEIKEARKLNSPIALSAIFG 48


>UniRef50_A6W063 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MWYL1|Rep: Putative uncharacterized
           protein - Marinomonas sp. MWYL1
          Length = 175

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 283 VSVYATKVFRKRLRTLLLFASTVWTNRTRSKLWCIRTTVAVSEI 414
           V V A  V    L T+L   S VW +R  S +W + T +AV+ I
Sbjct: 98  VYVNAITVVGFTLSTMLFVLSIVWLSRLMSPIWVLNTVIAVALI 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,645,821
Number of Sequences: 1657284
Number of extensions: 12062154
Number of successful extensions: 29043
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29030
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)