Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J18
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.30 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 135 PLIVILNIYFIDNWIIIPRN 76
           PL+  LNI+FI  W   P N
Sbjct: 17  PLVKYLNIFFITPWYDFPTN 36


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 477 LEPRGDDLLLRIENYLSKGPXSTISI 554
           LEP+GD+     E  L+ G  S +SI
Sbjct: 837 LEPKGDNRYTIREEILANGVLSGLSI 862


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 242 PTPNASSWSNLLCTISWISPSTKD 171
           P P   S++  + T+S I P  KD
Sbjct: 735 PPPRVESFAETVRTVSKIPPLYKD 758


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,993
Number of Sequences: 336
Number of extensions: 2924
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)