Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J18
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 27 0.11
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 26 0.26
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 1.8
AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced prot... 22 5.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.8
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.5 bits (58), Expect = 0.11
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 222 RRRIWSRRGVERDRARSTFSCYRNTCNYSSKE*YYHRKN 338
+ R RR ER + S N+CNYS+ YY+ N
Sbjct: 286 KERSRDRRERERSKEPKIISSLSNSCNYSNN--YYNNNN 322
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 26.2 bits (55), Expect = 0.26
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 88 YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNETVL 267
++P N +E DDQ+ ++ + AS V I + D F + N T+
Sbjct: 223 FWPSFNSAALEGDDQQRAIINTLLSISASCV---IAFATSALVSKDSKFNMVHIQNSTLA 279
Query: 268 GQPLVAIGT 294
G VAIGT
Sbjct: 280 GG--VAIGT 286
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 516 NYLSKGPXSTISIDLESIFCNINIL 590
NYL +G + SI +ES INIL
Sbjct: 320 NYLKRGGKTLTSISVESNTMFINIL 344
>AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced protein
75 protein.
Length = 58
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 490 PRGSRVSRCKPSGNVL 443
PRGS +PSG++L
Sbjct: 8 PRGSSAEEQQPSGDIL 23
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 490 PRGSRVSRCKPSGNVL 443
PRGS +PSG++L
Sbjct: 8 PRGSSAEEQQPSGDIL 23
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 237 SRRGVERDRARSTFSCYRNTCNYSSKE*YYHRK 335
SR ER+R++ T N NY + Y+ K
Sbjct: 289 SRDRTERERSKETKIISSNNYNYKNYNNNYNSK 321
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 237 SRRGVERDRARSTFSCYRNTCNYSSKE*YYHRK 335
SR ER+R++ T N NY + Y+ K
Sbjct: 300 SRDRTERERSKETKIISSNNYNYKNYNNNYNSK 332
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 453 PDGLHLLTLEPRGDDLLLRIENYLSKG 533
PD HL+TL+ + + L ++ S G
Sbjct: 750 PDSRHLVTLDKQETGVTLVVQEISSDG 776
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 585 YLYCKKLILNR 553
YLY KL+LNR
Sbjct: 259 YLYSHKLLLNR 269
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 585 YLYCKKLILNR 553
YLY KL+LNR
Sbjct: 259 YLYSHKLLLNR 269
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 25 KRVLNKRPQWNVTLEEPVAGNYYPV 99
KR+LN+ TLE PVA P+
Sbjct: 56 KRLLNELLSSYNTLERPVANESEPL 80
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 25 KRVLNKRPQWNVTLEEPVAGNYYPV 99
KR+LN+ TLE PVA P+
Sbjct: 56 KRLLNELLSSYNTLERPVANESEPL 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,690
Number of Sequences: 438
Number of extensions: 3736
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -