Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J17
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.2  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +3

Query: 300 VMTISSTVREKMGIWQKRDFDDQIADIIDSALMTK 404
           +   S T +E    W +  +DD +A++  + L+ +
Sbjct: 245 IAVFSLTHKEDPNYWSQGSYDDWLAEMAGARLIVE 279


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +3

Query: 300 VMTISSTVREKMGIWQKRDFDDQIADIIDSALMTK 404
           +   S T +E    W +  +DD +A++  + L+ +
Sbjct: 252 IAVFSLTHKEDPNYWSQGSYDDWLAEMAGARLIVE 286


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 168 MSKLFENRKKHQDCVKD 218
           + K+FEN +   DC+K+
Sbjct: 427 VDKVFENARFFTDCIKN 443


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 187 FSKSFDIFRNNTYLLF 140
           F K  DIFR NTY  F
Sbjct: 500 FYKPEDIFRPNTYNRF 515


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 319 RCGKKWEYGKSE 354
           R G+KW +G++E
Sbjct: 564 RKGEKWRWGRNE 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,328
Number of Sequences: 336
Number of extensions: 2391
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)