Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J17
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.               29   8.0  
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai...    29   8.0  
AL138849-2|CAI23477.1|  907|Homo sapiens zinc finger, CCHC domai...    29   8.0  
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai...    29   8.0  

>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
          Length = 1516

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 438 DIERALQTRWPEHNLIRYGSTTTGLALKSSDAD 536
           ++ + + T  PE +L  YGS+ T  ALKSSD +
Sbjct: 254 EMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 286


>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
           containing 11 protein.
          Length = 1645

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 438 DIERALQTRWPEHNLIRYGSTTTGLALKSSDAD 536
           ++ + + T  PE +L  YGS+ T  ALKSSD +
Sbjct: 382 EMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 414


>AL138849-2|CAI23477.1|  907|Homo sapiens zinc finger, CCHC domain
           containing 11 protein.
          Length = 907

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 438 DIERALQTRWPEHNLIRYGSTTTGLALKSSDAD 536
           ++ + + T  PE +L  YGS+ T  ALKSSD +
Sbjct: 235 EMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 267


>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
           containing 11 protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 438 DIERALQTRWPEHNLIRYGSTTTGLALKSSDAD 536
           ++ + + T  PE +L  YGS+ T  ALKSSD +
Sbjct: 382 EMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,743,132
Number of Sequences: 237096
Number of extensions: 1187995
Number of successful extensions: 2090
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2090
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)