Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J16
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   0.99 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   3.0  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    23   7.0  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.0  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 439 MGRRYVWWVGWRPWNSGGDY 498
           MG   +WW GW  +NSG  Y
Sbjct: 239 MGLFVLWW-GWLAFNSGSTY 257


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
 Frame = -1

Query: 423 RITRAKGAA---ARTTSSSNTPTCARATA----QGVHSPHCLCHRHHC 301
           R+ R KG A   A  +   ++P   R +     Q  H  HC C   HC
Sbjct: 248 RVKRKKGDAPFGAELSGGVSSPVGGRNSPKEQQQQQHGQHCCCRGSHC 295


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 346 CRCTSTSWSIATGCGSR 396
           C+CTS +     GC SR
Sbjct: 10  CKCTSPNCGAGCGCESR 26


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = +3

Query: 249 PDRRSGESAPV-GVP---NHTXXXXXXXXXEESAPPVPLHEHKLEYCYWMWFSRRPPSRE 416
           P  R+G +A   GVP   N            ++AP   LH+    +  WM  + +  S  
Sbjct: 161 PVSRAGSAAAAAGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTFYPWMAIAGKRYSES 220

Query: 417 LSAT 428
           L+ T
Sbjct: 221 LAGT 224


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 429 W*RITRAKGAAARTTSSSNTPTCARATAQGVHS 331
           W R       ++ ++SS N+ +C  +++ G HS
Sbjct: 32  WLRGNSGSPLSSISSSSRNSSSCNNSSSSGTHS 64


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 487  HCSTDATRPTRRNA 446
            HC+TD++   RRNA
Sbjct: 3343 HCATDSSVHVRRNA 3356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,411
Number of Sequences: 2352
Number of extensions: 12701
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)