Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J16
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    27   0.099
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   3.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 0.099
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
 Frame = +1

Query: 370 SIATGCGSRGGPLRASY-----PLP---PL--VMGRRYVWWVGWRPWNSGGDY 498
           S A  C    GP    Y     PLP   P+  +MG   +WW GW  +NSG  Y
Sbjct: 193 SSALACAIMLGPRLGRYDNGIDPLPLGCPVNAIMGLFVLWW-GWLAFNSGSTY 244


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -3

Query: 526 SSDGRTMCEYNPHHCSTDATRPTRRNACP 440
           SS   T C  +   C T   R +  + CP
Sbjct: 285 SSSASTTCSGHTVRCFTGGPRKSHESQCP 313


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 TSWSIATGCGSRGGPLRASYP 423
           +S ++ T     GGPL A YP
Sbjct: 86  SSLNVITNKTGNGGPLLAPYP 106


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 342 GVHSPHCLCHRHHC*YGLAHQLEQTHQIVDQ 250
           GV  PH   H+ H  YG A Q+ Q  Q V Q
Sbjct: 17  GVEHPHQ--HQQH--YGAAVQVPQQTQSVQQ 43


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 TSWSIATGCGSRGGPLRASYP 423
           +S ++ T    +GGPL   YP
Sbjct: 94  SSLNVVTNKKGKGGPLLRPYP 114


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 19  GHRLTKYYLNNKYICITSR 75
           GHR+ +Y L    + +TSR
Sbjct: 525 GHRMPRYCLFGNTVNLTSR 543


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 19  GHRLTKYYLNNKYICITSR 75
           GHR+ +Y L    + +TSR
Sbjct: 525 GHRMPRYCLFGNTVNLTSR 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,839
Number of Sequences: 438
Number of extensions: 3396
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)