Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J15
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    27   0.063
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.2  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          20   9.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 0.063
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 95  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELM 202
           +P ++  Q  +     LE+ RRA +  CL++LK L+
Sbjct: 40  RPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKVLV 75


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +1

Query: 64  DRVFARGRRPATRLAHLSISQSDEADARA*KARPHQPLLGRT*RAD 201
           D +F    RPAT    L +   +       +  P  PL+ R  + D
Sbjct: 379 DEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTD 424


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 99  PSRALINIAK**SRCSSVKGAPASTVAW 182
           PS   I+  +  +   +V+G P  TV+W
Sbjct: 314 PSTQTIDFGRPATFTCNVRGNPIKTVSW 341


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 349 WIHARSQ*SVPLFGFYSW 402
           WI+A S    PLFG+ S+
Sbjct: 23  WIYALSLSLPPLFGWGSY 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,590
Number of Sequences: 438
Number of extensions: 2005
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)