Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J12
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.9  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.9  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.9  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   4.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   5.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.7  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 273 WFPLPDHHC 247
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 273 WFPLPDHHC 247
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 273 WFPLPDHHC 247
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 273 WFPLPDHHC 247
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 273 WFPLPDHHC 247
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 84   SSHWETQRDAELRSRGTTTSS 22
            ++HW+T+      +R TTT S
Sbjct: 1180 TNHWQTKTTTSTTTRPTTTVS 1200


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 202 WPQSCHQNQQLVTCSDDP 149
           WP++    Q+   C+DDP
Sbjct: 143 WPENVDGCQKHPLCNDDP 160


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +1

Query: 136 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 258
           +QG       +   G+   ++  VKK KPE+    + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 131 ITYRFFAPVLSAQLITAPTGRP 66
           I  RF +  + A L+T+P  RP
Sbjct: 225 IVERFTSDRVHAALVTSPRARP 246


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 330 HDDPRIILEIYEHPVPPSK 274
           H++ +    IY HP  PSK
Sbjct: 92  HEEAQSPHRIYMHPESPSK 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,628
Number of Sequences: 336
Number of extensions: 2818
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)