Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J12
(473 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 217 3e-57
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 217 3e-57
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 217 3e-57
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 66 1e-11
07_03_0137 + 14101849-14102511 30 1.1
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 1.1
06_03_1073 - 27373259-27373304,27373542-27373624,27373719-273743... 29 1.4
04_04_0335 - 24491000-24491003,24491636-24491670,24491875-244919... 29 1.4
12_02_0304 + 17112677-17113195 29 2.5
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 29 2.5
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 29 2.5
12_01_0694 - 5923836-5924450 28 3.3
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 28 3.3
11_01_0122 - 960346-960728,961356-961608 28 3.3
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 3.3
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 28 4.4
06_01_0198 + 1529190-1530371 28 4.4
02_05_0591 - 30183105-30183869 28 4.4
11_06_0690 + 26303733-26306540 27 5.8
07_03_0138 - 14140653-14140988 27 5.8
02_04_0529 + 23697249-23697419,23697610-23697726,23698292-236983... 27 5.8
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 27 5.8
01_06_1755 - 39673030-39673338 27 5.8
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 27 5.8
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 7.7
06_01_0180 - 1397432-1399969 27 7.7
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 27 7.7
02_02_0500 - 10993675-10994067,10994434-10995738 27 7.7
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 27 7.7
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 217 bits (531), Expect = 3e-57
Identities = 96/118 (81%), Positives = 112/118 (94%)
Frame = +1
Query: 52 FRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELR 231
FR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LR
Sbjct: 14 FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 73
Query: 232 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 405
KKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 74 KKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 217 bits (531), Expect = 3e-57
Identities = 96/118 (81%), Positives = 112/118 (94%)
Frame = +1
Query: 52 FRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELR 231
FR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LR
Sbjct: 14 FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 73
Query: 232 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 405
KKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 74 KKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 217 bits (531), Expect = 3e-57
Identities = 96/118 (81%), Positives = 112/118 (94%)
Frame = +1
Query: 52 FRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELR 231
FR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGKP+LR
Sbjct: 31 FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 90
Query: 232 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 405
KKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 91 KKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +1
Query: 88 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 258
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 259 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 384
R R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>07_03_0137 + 14101849-14102511
Length = 220
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 365
G +R +E G A +GD +T +AGRG GG R + +GGD G H
Sbjct: 85 GRGGQRDAGDEEDGKAGAGDGGLQTNQRAGRG--------GGRRGDAEGGDGAAGPH 133
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 113 APVLSAQLITAPTGRPSEMRNFAPAEPPRP 24
AP S+ L TAP P++ + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>06_03_1073 -
27373259-27373304,27373542-27373624,27373719-27374397,
27374493-27374563,27374635-27374727,27375855-27375928,
27376016-27376073,27376212-27376349
Length = 413
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 441 IYSSYGAGVRRNTGP*VSALLSDGSCDSRAFHLPLVVHDDPRIILEIY 298
+ S Y + +R N+ ++DGS DS FH PLV+ DD + +Y
Sbjct: 169 VKSVYQSAIRGNSPFQNIKSINDGSSDS-PFHTPLVLRDDMQTPRTVY 215
>04_04_0335 -
24491000-24491003,24491636-24491670,24491875-24491923,
24492043-24492119,24492207-24492340,24492471-24492578,
24493145-24493214,24493399-24493476,24493592-24493714,
24494238-24494297,24494424-24494468,24494936-24495013,
24495298-24495354,24495623-24495739,24495856-24496026
Length = 401
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -1
Query: 419 ALDAIRGHKSAHSLATGPVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRC---LITT 249
+ D +RGH A A+ +S F + KY +T + + G L T
Sbjct: 270 SFDILRGHSRATMFLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAFLGHT 329
Query: 248 AGITFFLSSGLPFLTVATIMSP 183
+ F L + F+++ SP
Sbjct: 330 LTVNFLLGISIVFISMHQFFSP 351
>12_02_0304 + 17112677-17113195
Length = 172
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = -1
Query: 242 ITFFLSSGLPFLTVATIMSPE-PAAGNLFRRPLIPCTAITYRFFAPVLSAQLITA---PT 75
+ F + LPFL+ A P+ P N R P P A + A A +I P
Sbjct: 8 VIFLAAIILPFLSFAEAQQPQTPPRRNPPRAPPSPRRAPSPSVTAEPTPAPVIAPSPPPV 67
Query: 74 GRPSEMRNFAPAEPPRP 24
PS+ AP +PP P
Sbjct: 68 VAPSQPLVVAPTQPPTP 84
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 243 ASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTRR 377
++ G AA K+G G + GG RE+QG D+ +G + +R
Sbjct: 26 SNKGTPAARKRIKSGGGAREKKENSGGAREEQGKDDSVGEEQVQR 70
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 104 LSAQLITAPTGRPSEMRNFAPAEPP 30
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
>12_01_0694 - 5923836-5924450
Length = 204
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 365
G R +E G A +GD T +AGRG GG R + +GGD G H
Sbjct: 65 GRGDRRDAGDEEDGEAGAGDGGLRTNQRAGRG--------GGRRGDAEGGDGAAGPH 113
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 104 LSAQLITAPTGRPSEMRNFAPAEPP 30
++A TAP GRP + FAP+ PP
Sbjct: 514 VTASPTTAPGGRPPKRPAFAPSAPP 538
>11_01_0122 - 960346-960728,961356-961608
Length = 211
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 429 YGAGVRRNTGP*VSALLSDGSCDSRAFHLPLVVHDDPRIILE 304
YGAG R G +A LSDG C +R L L+ H + E
Sbjct: 62 YGAGGARARGS--AAALSDGVCGARVQQLHLLQHPVKNAVAE 101
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 307 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 393
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 104 LSAQLITAPTGRPSEMRNFAPAEP 33
++A+ TAP+GRP FAP+ P
Sbjct: 295 ITARPTTAPSGRPPRRPTFAPSAP 318
>06_01_0198 + 1529190-1530371
Length = 393
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 233 FLSSGLPFLTVATIMSPEPAAGNLFRRPLIPCTAITYRFF 114
+L++ L L VAT++S P AG L +P T F+
Sbjct: 171 YLAAALGALLVATLLSSSPFAGALASLAALPATRFARSFW 210
>02_05_0591 - 30183105-30183869
Length = 254
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 339 LVVHDDPRIILEIYEHPVPPSKWFPLPDHHCWHYLFP 229
+V H D ++ +Y P P P HH +H L P
Sbjct: 157 MVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMP 193
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 134 AITYRFFAPVL-SAQLITAPTGRPSEMRNFAPAEPPRPLL 18
A+ F PV S Q + P + S + A EPP+PLL
Sbjct: 561 AVVGAFTRPVFWSPQPVFVPAAKDSPPESAAATEPPQPLL 600
>07_03_0138 - 14140653-14140988
Length = 111
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 198 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTR 374
G ERQ Q +G S G++ E + G G F G GG E + ER R+R
Sbjct: 46 GREGERQRGRQWRGRGSGGEEGVEGGGEGGEGGG-FGGGEGGGGEVEAAVERRAAERSR 103
>02_04_0529 +
23697249-23697419,23697610-23697726,23698292-23698348,
23698539-23698616,23698722-23698766,23698858-23698917,
23699340-23699417,23699524-23699646,23699772-23699849,
23700048-23700117,23700317-23700424,23700543-23700676,
23700756-23700832,23701027-23701075,23701689-23701697
Length = 417
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -1
Query: 419 ALDAIRGHKSAHSLATGPVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRC---LITT 249
+ + +RGH A A+ +S F + KY +T + + G L T
Sbjct: 296 SFNILRGHSRATMFLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAFLGHT 355
Query: 248 AGITFFLSSGLPFLTVATIMSP 183
I F L + F+++ SP
Sbjct: 356 LTINFLLGISVVFISMHQFFSP 377
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 239 TFFLSSGLPFLTVATIMSPEPAAGNLFRRPLIPC 138
T+ ++G F ++++ SPE GN F+ ++ C
Sbjct: 422 TYLKAAGNSFAVLSSVSSPEVPCGNCFKVEILYC 455
>01_06_1755 - 39673030-39673338
Length = 102
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +3
Query: 279 KAGRGVHIFRG*CGGHREQQG---GDERLGYHR 368
+AGRG H G GGH G GD LG HR
Sbjct: 41 RAGRGHHHGNGGGGGHLGYSGSRHGDAHLGGHR 73
>01_06_1428 -
37301697-37302175,37302300-37302471,37302570-37303403,
37303847-37304012,37304334-37304573,37304765-37304905,
37305623-37305735,37306549-37306614,37307242-37307480,
37307615-37307897
Length = 910
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 110 PVLSAQLITAPTGRPSEMRNFAPAEPPRPL-LDILP 6
PVL A+L + +G P+ A A PP PL L++LP
Sbjct: 493 PVLRARLRGSASGSPTLAFPSAAAPPPPPLALELLP 528
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 218 LPFLTVATIMSPEPAAGNLFRRPLIPCTAITYR 120
LP+ ++ P PAA L+ RP P + R
Sbjct: 333 LPYPPYPAVLLPPPAAATLYGRPPAPAPGVAAR 365
>06_01_0180 - 1397432-1399969
Length = 845
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 26 DVVVPRERSSASRWVSQWEL*SIVQIIQEQKI 121
D +PRE+ S + W QW+ +++ I + K+
Sbjct: 717 DPQLPREQVSLAEWGMQWKRKGLIEKIMDPKL 748
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 268 KPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC-ADLWP 402
KP D V + DN GV+V+ G GS+ +C A+++P
Sbjct: 214 KPLSGGDEVMLLV-DNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYP 258
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -1
Query: 368 PVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRCLITT--AGITFFL--SSGLPFLTV 201
P EP I+ ++PA+ +T S + NG+ +++T +G +F+ SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 200 ATIMSPEPAAGN 165
+ EP A N
Sbjct: 285 FKPIDEEPMAKN 296
>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 27.1 bits (57), Expect = 7.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 282 PSKWFPLPDHHCW 244
P WFP PD +CW
Sbjct: 1420 PWFWFPSPDRNCW 1432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,435,433
Number of Sequences: 37544
Number of extensions: 339180
Number of successful extensions: 1118
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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