Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J11
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 237 6e-63
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 236 9e-63
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 236 9e-63
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 236 1e-62
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 229 1e-60
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 227 4e-60
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 135 8e-39
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 120 1e-27
07_01_0533 + 3942813-3943164,3943244-3943458 32 0.40
06_03_0384 + 20174441-20175788,20176215-20176858 32 0.40
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 29 2.2
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404 29 2.8
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 29 3.8
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 29 3.8
04_04_0267 + 24048649-24049140,24049521-24049835 28 6.6
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 27 8.7
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 237 bits (579), Expect = 6e-63
Identities = 111/136 (81%), Positives = 120/136 (88%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D HL+PS+ ESKVFY KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A DIA+ +L
Sbjct: 110 LDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADL 169
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
P THPIRLGLALNFSVFYYEILNSPDRAC LAK AFDDAIAELDTL EESYKDSTLIMQL
Sbjct: 170 PTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQL 229
Query: 370 LRDNLTLWTSDMQGDG 417
LRDNLTLWTSD DG
Sbjct: 230 LRDNLTLWTSDNAEDG 245
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 236 bits (578), Expect = 9e-63
Identities = 110/135 (81%), Positives = 122/135 (90%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
++ HL+PSS ESKVFY KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL
Sbjct: 111 LESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAEL 170
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PPTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTLSEESYKDSTLIMQL
Sbjct: 171 PPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQL 230
Query: 370 LRDNLTLWTSDMQGD 414
LRDNLTLWTSD+ D
Sbjct: 231 LRDNLTLWTSDISED 245
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 236 bits (578), Expect = 9e-63
Identities = 110/132 (83%), Positives = 121/132 (91%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D HL+PSS ESKVFY KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL
Sbjct: 329 LDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAEL 388
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PPTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTLSEESYKDSTLIMQL
Sbjct: 389 PPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQL 448
Query: 370 LRDNLTLWTSDM 405
LRDNLTLWTSD+
Sbjct: 449 LRDNLTLWTSDI 460
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 236 bits (577), Expect = 1e-62
Identities = 112/153 (73%), Positives = 127/153 (83%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D HL+PSS ESKVFY KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA DIA+ +L
Sbjct: 105 LDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADL 164
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVFYYEILNSPD+AC LAK AFD+AI+ELDTL EESYKDSTLIMQL
Sbjct: 165 APTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQL 224
Query: 370 LRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQ 468
LRDNLTLWTSD+ DG E ++ + E Q
Sbjct: 225 LRDNLTLWTSDLTEDG-GDEVKEASKGDACEGQ 256
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 229 bits (561), Expect = 1e-60
Identities = 111/154 (72%), Positives = 126/154 (81%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D HL+PS+ ESKVFY KMKGDYHRYLAEF +G++RK+AAE+++ AYKAA DIA+ +L
Sbjct: 88 LDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADL 147
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELD+L EESYKDSTLIMQL
Sbjct: 148 APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQL 207
Query: 370 LRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
LRDNLTLWTSD DG E KE A E D
Sbjct: 208 LRDNLTLWTSDANDDGGD---EIKEAAAPKEPGD 238
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 227 bits (556), Expect = 4e-60
Identities = 106/136 (77%), Positives = 120/136 (88%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D+ L+P++ ++KVFY KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA DIAM EL
Sbjct: 115 LDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKEL 174
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQL
Sbjct: 175 SPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQL 234
Query: 370 LRDNLTLWTSDMQGDG 417
LRDNLTLWTSDMQ DG
Sbjct: 235 LRDNLTLWTSDMQDDG 250
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 135 bits (326), Expect(2) = 8e-39
Identities = 66/92 (71%), Positives = 75/92 (81%)
Frame = +1
Query: 145 LVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDT 324
LV Y AS A T+L PT PIRLGLALN SVFY EI+NSPD+AC+LAK AFD+A+AEL +
Sbjct: 141 LVVY-TASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPS 199
Query: 325 LSEESYKDSTLIMQLLRDNLTLWTSDMQGDGE 420
LSEE+YKDSTLIMQLLRDNL LW SDM D +
Sbjct: 200 LSEENYKDSTLIMQLLRDNLALWNSDMADDAD 231
Score = 43.2 bits (97), Expect(2) = 8e-39
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 73 KGDYHRYLAEFATGNDRKEAAENSLVAYKA 162
KGDY+RYLAEF TG ++ E +E SL AY+A
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYEA 114
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 120 bits (288), Expect = 1e-27
Identities = 64/139 (46%), Positives = 94/139 (67%)
Frame = +1
Query: 19 HLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPT 198
H +P + +GE+ VF+YKMKGDY+RYLAEF+TG ++K A + SL+AY+A
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWP---------- 154
Query: 199 HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRD 378
A FS+ EI+NSP+RA ++AK A D+A AE+++ E YKDS L+MQLL++
Sbjct: 155 ------CAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKE 206
Query: 379 NLTLWTSDMQGDGESAETE 435
NL LWTS++ G GE+++ +
Sbjct: 207 NLALWTSELTG-GETSKDD 224
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 163 LPCTRPASSRQPPCGRCPSRTPPGIGGSRPSFCSRRLSTLRSVSWG 26
+P PA+ P PS TP G GGS+ + + +T +S S G
Sbjct: 121 VPMPSPATPATPAAPAVPSETPAGTGGSKATPTTATTTTGQSASGG 166
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 55 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLA 222
++ Y KGD HR+L E G E + A ++++ P H I LG+A
Sbjct: 456 LYEYMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +1
Query: 118 DRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 297
D ++ E ++ K + A L R AL S + E+ ++ RL +
Sbjct: 987 DGEKPDEGKVLREKDTEENAKNALGVEQIERQDKALTESCIH-EVEQVDGQSERLTRTGV 1045
Query: 298 DDAIAELDTLSEESYKDSTLIMQLLRDN--LTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
++ AE+ E + + + + N + T+ +Q +GE E K+ A+ +QD
Sbjct: 1046 EEKHAEITQEQENEFDNGVMETSKVSVNGAMPYSTASIQSEGEQKEASDKDMAEKQSNQD 1105
Query: 472 V 474
+
Sbjct: 1106 I 1106
>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
Length = 635
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 391 WTSDMQGDGESAETEQKEQAQDVE 462
W SD +G G+ E E++E+ + VE
Sbjct: 3 WDSDSEGSGDEEEEEEEEEEEGVE 26
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 195 GGQFGHGDV*GCLVRDQRVLGSLLAVVARRELRQ 94
GG+ V CL+ ++++G L+V RREL Q
Sbjct: 616 GGELARSSVNYCLIASKQMVGIFLSVWVRRELVQ 649
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 48 VESLLLQNEGRLPPIPGGVRDGQRPQGGCRELAGRV 155
+E L L+NEGR IP + + GC + G V
Sbjct: 418 LEKLRLENEGRNKVIPNLLASSMEKEDGCSRVGGAV 453
>04_04_0267 + 24048649-24049140,24049521-24049835
Length = 268
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -2
Query: 169 LRLPCTRPASSRQPPCGRCP----SRTPPGIGGSR 77
LR P P +SR+PP RC + PP GG R
Sbjct: 2 LRAPPQAPRASRRPPPPRCSPAAGASPPPSAGGIR 36
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 397 SDMQGDGESAETEQKEQAQDVEDQD 471
SD +GD E E E++E+ ++ +D D
Sbjct: 450 SDEEGDEEELEEEEEEEEEEEDDDD 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,135
Number of Sequences: 37544
Number of extensions: 247472
Number of successful extensions: 1148
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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