Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J11
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 208 2e-54
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 196 8e-51
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 195 2e-50
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 134 6e-32
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 33 0.16
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 33 0.16
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 33 0.16
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 33 0.16
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 33 0.16
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 33 0.16
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 33 0.16
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 33 0.16
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 33 0.16
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 33 0.16
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 33 0.16
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 33 0.16
Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 2.5
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 2.5
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 29 2.5
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 28 4.4
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 28 4.4
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 27 7.7
AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical... 27 7.7
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 208 bits (509), Expect = 2e-54
Identities = 101/143 (70%), Positives = 116/143 (81%), Gaps = 1/143 (0%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+DK LIP + ESKVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++
Sbjct: 103 LDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKM 162
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVF+YEILN+PD+AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQL
Sbjct: 163 QPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQL 222
Query: 370 LRDNLTLWTSDMQGDGESA-ETE 435
LRDNLTLWTSD D A ETE
Sbjct: 223 LRDNLTLWTSDAATDDTDANETE 245
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 196 bits (479), Expect = 8e-51
Identities = 96/144 (66%), Positives = 113/144 (78%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D+ LI + ESKVFY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++
Sbjct: 103 LDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKM 161
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVFYYEILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQL
Sbjct: 162 QPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQL 221
Query: 370 LRDNLTLWTSDMQGDGESAETEQK 441
LRDNLTLWTSD+ + + E Q+
Sbjct: 222 LRDNLTLWTSDVGAEDQEQEGNQE 245
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 195 bits (475), Expect = 2e-50
Identities = 95/144 (65%), Positives = 112/144 (77%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+D+ LI + ESK FY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++
Sbjct: 103 LDEFLIVKAGAAESKAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKM 161
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQL 369
PTHPIRLGLALNFSVFYYEILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQL
Sbjct: 162 QPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQL 221
Query: 370 LRDNLTLWTSDMQGDGESAETEQK 441
LRDNLTLWTSD+ + + E Q+
Sbjct: 222 LRDNLTLWTSDVGAEDQEQEGNQE 245
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 134 bits (323), Expect = 6e-32
Identities = 61/93 (65%), Positives = 74/93 (79%)
Frame = +1
Query: 10 VDKHLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 189
+DK LIP + ESKVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++
Sbjct: 103 LDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKM 162
Query: 190 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAK 288
PTHPIRLGLALNFSVF+YEILN+PD+AC+LAK
Sbjct: 163 QPTHPIRLGLALNFSVFFYEILNAPDKACQLAK 195
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +1
Query: 70 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYE 249
M D+ RYL ++ N R+E A S +AY+ A IA ++ PTHPIRLGLALN S ++
Sbjct: 1 MVADHFRYLVQYDDIN-REEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
Query: 250 ILNSPDRACRLAKAAFDDAIAELDTL--SEESYKDSTLIMQLLRDNLTLWTSDMQGDGES 423
+LN P A +A++A D A EL+ + S +SY S L +L T + + DG+
Sbjct: 60 VLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLKSTHEQRVDGKE 119
Query: 424 AE 429
E
Sbjct: 120 GE 121
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 377 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 435
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 436 ALPPQQPI-CTLAISLPEYTGEIKTAP 461
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 487 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 545
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 546 ALPPQQPI-CTLAISLPEYTGEIKTAP 571
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1391 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1449
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1450 ALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1391 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1449
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1450 ALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1391 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1449
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1450 ALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1397 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1455
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1456 ALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1397 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1455
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1456 ALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1391 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1449
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1450 ALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1397 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1455
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1456 ALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 1397 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 1455
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 1456 ALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 494 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 552
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 553 ALPPQQPI-CTLAISLPEYTGEIKTAP 578
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EVDKHLIPSSQTGES-KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMT 183
E +L+P +++G+ +F+ + + ++ + ND EAA + + A I
Sbjct: 567 EFSGNLVPITKSGDQLSLFFLPFQENRLAFMVK-TRSNDDNEAATEGRIGFMAEPKIRSD 625
Query: 184 ELPPTHPIRLGLALNFSVFYYEILNSP 264
LPP PI LA++ + EI +P
Sbjct: 626 ALPPQQPI-CTLAISLPEYTGEIKTAP 651
>Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical
protein ZK218.11 protein.
Length = 270
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 133 QPPCGRCPSRTPPGIGG 83
Q CGRCPS T P GG
Sbjct: 205 QKTCGRCPSTTTPRTGG 221
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 345
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 476 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 530
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 345
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 478 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 532
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 292 AFDDAIAELDTLSEESYKDSTLIM-----QLLRDNL-TLWTSDMQGDGESAETEQKEQAQ 453
A D+A DTL +ES+K +LI Q RD L + T+DM G+ T +K+ A
Sbjct: 352 AIDNAKKLRDTLRKESFKQKSLIFDKGFWQRNRDKLRNMITADMTGNISRVLT-RKKPAP 410
Query: 454 DVEDQD 471
+E+ D
Sbjct: 411 KLEESD 416
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 331 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
E+ Y+D T D + W S + + E++E+ +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 331 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
E+ Y+D T D + W S + + E++E+ +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 331 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
E+ Y+D T D + W S + + E++E+ +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 286 KAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 396
K FD I E+D + ES+ + I+Q++ ++ L+T
Sbjct: 223 KCPFDRKIIEMDGRNVESFPKNYTILQMVTHSINLYT 259
>AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical
protein Y37E3.10 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 316 LDTLSE--ESYKDSTLIMQLLRDNLTLWTSDMQGDGESAETEQKEQAQDVEDQD 471
LDT+ E +K I + R + +GDG+ E E +E + ED+D
Sbjct: 251 LDTIKNAIEGFKGKFTIKEEARIVTDIDDEKKKGDGDEDEEESEEDEDEEEDED 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,503,064
Number of Sequences: 27780
Number of extensions: 175983
Number of successful extensions: 668
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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