Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J10
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF326939-1|AAG49389.1|  109|Caenorhabditis elegans mitochondrial...    58   5e-09
AF038604-5|AAB92010.1|  109|Caenorhabditis elegans Hypothetical ...    58   5e-09
U49941-7|AAB53875.1|   88|Caenorhabditis elegans Mitochondrial a...    48   5e-06
L12348-1|AAA28107.1|   88|Caenorhabditis elegans ATPase inhibito...    48   5e-06
AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical ...    30   0.85 
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ...    30   0.85 
U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    27   6.0  
U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like pr...    27   6.0  
Z81098-5|CAB97235.1|  330|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    27   8.0  

>AF326939-1|AAG49389.1|  109|Caenorhabditis elegans mitochondrial
           ATPase inhibitor protein.
          Length = 109

 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 24/65 (36%), Positives = 39/65 (60%)
 Frame = +3

Query: 189 TIREPGGAFGEMGAARXXXXXXXXXXXXLHELKTHLDKEINFHSEQIKRHEDAINRHKTK 368
           +IR+ GGAFG+M AAR            L EL+ H+ +E+  H  Q++ H+  + RH+ +
Sbjct: 36  SIRDAGGAFGKMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQR 95

Query: 369 LAEIE 383
           ++EIE
Sbjct: 96  ISEIE 100


>AF038604-5|AAB92010.1|  109|Caenorhabditis elegans Hypothetical
           protein B0546.1 protein.
          Length = 109

 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 24/65 (36%), Positives = 39/65 (60%)
 Frame = +3

Query: 189 TIREPGGAFGEMGAARXXXXXXXXXXXXLHELKTHLDKEINFHSEQIKRHEDAINRHKTK 368
           +IR+ GGAFG+M AAR            L EL+ H+ +E+  H  Q++ H+  + RH+ +
Sbjct: 36  SIRDAGGAFGKMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQR 95

Query: 369 LAEIE 383
           ++EIE
Sbjct: 96  ISEIE 100


>U49941-7|AAB53875.1|   88|Caenorhabditis elegans Mitochondrial
           atpase inhibitorfamily protein 1 protein.
          Length = 88

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +3

Query: 189 TIREPGGAFGEMGAARXXXXXXXXXXXXLHELKTHLDKEINFHSEQIKRHEDAINRHKTK 368
           +IRE GG+ G MGA R            L  LK  L+ ++    ++I+ HE  + +H+ +
Sbjct: 19  SIREAGGSLGMMGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQR 78

Query: 369 LAEIEK 386
           L EIEK
Sbjct: 79  LKEIEK 84


>L12348-1|AAA28107.1|   88|Caenorhabditis elegans ATPase inhibitor
           protein.
          Length = 88

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +3

Query: 189 TIREPGGAFGEMGAARXXXXXXXXXXXXLHELKTHLDKEINFHSEQIKRHEDAINRHKTK 368
           +IRE GG+ G MGA R            L  LK  L+ ++    ++I+ HE  + +H+ +
Sbjct: 19  SIREAGGSLGMMGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQR 78

Query: 369 LAEIEK 386
           L EIEK
Sbjct: 79  LKEIEK 84


>AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical
           protein C35E7.5b protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 279 ELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 389
           E  + L+KE N H E +K+  D+    +   AE+EKK
Sbjct: 517 EAISSLEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553


>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
           protein C35E7.5a protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 279 ELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 389
           E  + L+KE N H E +K+  D+    +   AE+EKK
Sbjct: 517 EAISSLEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553


>U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical
           protein K05F1.6b protein.
          Length = 627

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 389 LLLNFSQFGLVAVDGVFVTLDLFTVEVY 306
           L L F  FG +AV G F  L +FT E+Y
Sbjct: 431 LALAFMYFGKIAVQGAFNILYIFTSELY 458


>U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical
           protein K05F1.6a protein.
          Length = 773

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 389 LLLNFSQFGLVAVDGVFVTLDLFTVEVY 306
           L L F  FG +AV G F  L +FT E+Y
Sbjct: 577 LALAFMYFGKIAVQGAFNILYIFTSELY 604


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 377 FSQFGLVAVDGVFVTLDLFTVEVYFF 300
           F+   +V +DG FVT D   V +YFF
Sbjct: 152 FTTTTVVEIDGKFVTFDFLEVFLYFF 177


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 273 LHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 389
           L EL+  LD++     +  K  ED    H+ ++AE+EK+
Sbjct: 358 LGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKR 396


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 273 LHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 389
           L EL+  LD++     +  K  ED    H+ ++AE+EK+
Sbjct: 358 LGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKR 396


>U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like
           protein protein 8 protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 297 DKEINFHSEQIKRHEDAINRHKTKLAEIEKK 389
           ++EIN   E++ R +D++   K+K  E+E++
Sbjct: 371 EREINAQKEEVNRIKDSLRLEKSKRNELEEE 401


>Z81098-5|CAB97235.1|  330|Caenorhabditis elegans Hypothetical
           protein K07A12.7 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 273 LHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAE 377
           L EL    DKE+  H  + +    A+N    KLA+
Sbjct: 249 LEELHEKYDKEVEEHKRETQEKRKALNNELDKLAQ 283


>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 273 LHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 386
           + E++  L ++   H E  K   D + RH T + E EK
Sbjct: 546 MDEIRAMLARKSTHHKEAEKAEHDMLQRHLTGMEEREK 583


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,696,588
Number of Sequences: 27780
Number of extensions: 136627
Number of successful extensions: 388
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)