Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J10
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   2.5  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   2.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   3.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   3.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.5  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   10.0 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   10.0 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   10.0 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   10.0 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   10.0 

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 77  ENEFSKTKSIFCTSNY*YKN 136
           E E SK   I  ++NY YKN
Sbjct: 294 ERERSKETKIISSNNYNYKN 313


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 77  ENEFSKTKSIFCTSNY*YKN 136
           E E SK   I  ++NY YKN
Sbjct: 305 ERERSKETKIISSNNYNYKN 324


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 388 SEHNTYIRVHQIIKC 432
           S+ N YIR ++++KC
Sbjct: 108 SDANIYIRFNKLVKC 122


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 388 SEHNTYIRVHQIIKC 432
           S+ N YIR ++++KC
Sbjct: 108 SDANIYIRFNKLVKC 122


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 416 WTRMYVLCSLLLNFSQFGLVAVDGVFVTLDL 324
           W    V+C ++  F  FGL     V V + +
Sbjct: 104 WKAGDVMCRIMAFFRMFGLYLSSFVLVCISM 134


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 255 YKSILLLWQPP 223
           Y S L++WQPP
Sbjct: 136 YYSGLVVWQPP 146


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 191 YKRAWRCIRRNGG 229
           Y+ A RC+  NGG
Sbjct: 237 YEGALRCLAHNGG 249


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 191 YKRAWRCIRRNGG 229
           Y+ A RC+  NGG
Sbjct: 237 YEGALRCLAHNGG 249


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 448 ITRLTDTL*FDGLECMCYVHFFSISASLV 362
           +T LTD L  +  +C   +   SIS  LV
Sbjct: 168 LTTLTDCLRSELAQCESNIKVISISPDLV 196


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 191 YKRAWRCIRRNGG 229
           Y+ A RC+  NGG
Sbjct: 237 YEGALRCLAHNGG 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,591
Number of Sequences: 438
Number of extensions: 2041
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)