Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J06
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 178 2e-45
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 178 2e-45
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 174 4e-44
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 30 1.7
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.9
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.9
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 28 6.8
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical ... 27 9.0
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 178 bits (434), Expect = 2e-45
Identities = 92/162 (56%), Positives = 116/162 (71%), Gaps = 4/162 (2%)
Frame = +1
Query: 187 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 366
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 367 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 534
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 535 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNSG 660
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL+SG
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSG 179
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 178 bits (434), Expect = 2e-45
Identities = 92/162 (56%), Positives = 116/162 (71%), Gaps = 4/162 (2%)
Frame = +1
Query: 187 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 366
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 367 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 534
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 535 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNSG 660
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL+SG
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSG 179
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 174 bits (424), Expect = 4e-44
Identities = 90/161 (55%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
Frame = +1
Query: 187 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 366
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 367 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 534
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 535 KSRSILQRLYSKHIISVANEIGRLPPTFLDAAQLATAILNS 657
KSR+ LQRLY+ I+ NEIGR PP+F DA+ A AIL +
Sbjct: 138 KSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILKA 178
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 519 YLRRRQVPQHLATSLQQTHHQRC 587
YLRR +P HL + + + HH RC
Sbjct: 1510 YLRRLSLPSHLFSWIAERHHIRC 1532
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 397 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 510
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 397 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 510
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 452 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 631
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 632 SS 637
SS
Sbjct: 711 SS 712
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 452 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 631
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 632 SS 637
SS
Sbjct: 711 SS 712
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 452 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 631
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 632 SS 637
SS
Sbjct: 711 SS 712
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 452 STPVSRR*SATGSTNPELRISRLSASETSPAASCNVSTANTSSALLMKSAACRPRSWTRL 631
++ V R SA+G + + +T+P ++ + SA L + ACR + W L
Sbjct: 651 ASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLACRDKKWVLL 710
Query: 632 SS 637
SS
Sbjct: 711 SS 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 489 EPVADHLRDTGVDSTTQSSVRGHSDVEL 406
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 489 EPVADHLRDTGVDSTTQSSVRGHSDVEL 406
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = -3
Query: 591 ISNADDVFAVETLQDAAGLVSDADNLDILSSGFVEPV--ADHLRD-----TGVDSTTQSS 433
+S+ DD+F++ ++ + S DNL I+ S + P+ H + T + TTQ+S
Sbjct: 158 VSSYDDLFSLNVMKHLCQIDSIVDNL-IIESNYTNPIQALKHSLNIPYYTTCPNMTTQNS 216
Query: 432 VRGHSDVELL--RVILKGDYLSPFVELNSAFAI 340
++ ++L R +L+ ++ E+ SAF+I
Sbjct: 217 CEALNENDILNFRYLLQKCKINSTDEVCSAFSI 249
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 430 DRGLCGAVHTGVSKVIRNRLNEPGAENI-KVI---CVGDKSRSILQRLYSKHII 579
D G + T K++ ++ + PG ++ K+I C+G+ R +L+RL ++
Sbjct: 295 DNGEADYIFTRYDKIVDSKSDHPGVNSLDKLIAGMCMGELVRLVLERLCENKVL 348
>AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical
protein ZK6.5 protein.
Length = 345
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 DIFRRLVYFN*KRLK-KLVLFEIIYIKFTISTVLKKSRENVESCRTGCMHPSGGGGQPPA 197
D ++ + N R + + L + YIK T VL S++++ + G P G PP
Sbjct: 156 DFMKKFSFVNLLRFEDQKNLMKEFYIKLT---VLINSKQSMSCGKEGMTFPDGSDVLPPT 212
Query: 198 EQEYG 212
E+G
Sbjct: 213 SSEWG 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,148,666
Number of Sequences: 27780
Number of extensions: 321369
Number of successful extensions: 1080
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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