Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J05
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 227 1e-59
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 224 2e-58
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 223 3e-58
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 167 3e-41
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 77 5e-14
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 45 2e-04
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 45 2e-04
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 45 2e-04
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 45 2e-04
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 45 2e-04
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 31 2.7
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 31 2.7
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 31 2.7
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 31 2.7
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 31 2.7
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 31 2.7
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 31 2.7
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 227 bits (556), Expect = 1e-59
Identities = 109/134 (81%), Positives = 119/134 (88%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFGG 549
KHIDFSL+SP+GG
Sbjct: 154 QKHIDFSLRSPYGG 167
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 108/135 (80%), Positives = 118/135 (87%)
Frame = +1
Query: 145 EKYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQM 324
E+YGLRNKREVWRVK+TLA+IRKAARELLTL++KDP+RL EGNA DE +M
Sbjct: 33 EEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNALLWRLVCIGVLDEGKM 92
Query: 325 KLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLD 504
KLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSFIVRLD
Sbjct: 93 KLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLD 152
Query: 505 SGKHIDFSLKSPFGG 549
S KHIDFSL SP+GG
Sbjct: 153 SQKHIDFSLCSPYGG 167
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRR FEK+RLDQELK+I E
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEE 34
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 223 bits (545), Expect = 3e-58
Identities = 108/133 (81%), Positives = 117/133 (87%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL EGNA DE +MK
Sbjct: 34 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRLGVLDEGKMK 93
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDS 507
LDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS
Sbjct: 94 LDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDS 153
Query: 508 GKHIDFSLKSPFG 546
KHIDFSL+SP G
Sbjct: 154 QKHIDFSLRSPTG 166
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 69 VFSKTYVTPRRPFEKARLDQELKIIGE 149
V KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGE 34
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 167 bits (405), Expect = 3e-41
Identities = 80/102 (78%), Positives = 87/102 (85%)
Frame = +1
Query: 244 KDPKRLVEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 423
+DP+RL EGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 424 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 549
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG 106
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 76.6 bits (180), Expect = 5e-14
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVE 267
+YGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RL E
Sbjct: 25 EYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFE 64
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 78 KTYVTPRRPFEKARLDQELKIIGE 149
KTYVTPRRPFEK+RLDQELK+IGE
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGE 25
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+Y L+ + + R +R+ AR L L E+D R V +A +
Sbjct: 36 RYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFR-VRASAALLDKLYALGLVPTRGS 94
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 495
L+ + F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+Y L+ + + R +R+ AR L L E+D R V +A +
Sbjct: 36 RYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFR-VRASAALLDKLYALGLVPTRGS 94
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 495
L+ + F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+Y L+ + + R +R+ AR L L E+D R V +A +
Sbjct: 36 RYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFR-VRASAALLDKLYALGLVPTRGS 94
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 495
L+ + F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+Y L+ + + R +R+ AR L L E+D R V +A +
Sbjct: 36 RYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFR-VRASAALLDKLYALGLVPTRGS 94
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 495
L+ + F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 148 KYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLVEGNAXXXXXXXXXXXDEKQMK 327
+Y L+ + + R +R+ AR L L E+D R V +A +
Sbjct: 36 RYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFR-VRASAALLDKLYALGLVPTRGS 94
Query: 328 LDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 495
L+ + F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 333 IQFHL 319
+ L
Sbjct: 511 QMYKL 515
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 333 IQFHL 319
+ L
Sbjct: 511 QMYKL 515
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 333 IQFHL 319
+ L
Sbjct: 511 QMYKL 515
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 169
Query: 333 IQFHL 319
+ L
Sbjct: 170 QMYKL 174
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 408
Query: 333 IQFHL 319
+ L
Sbjct: 409 QMYKL 413
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 333 IQFHL 319
+ L
Sbjct: 483 QMYKL 487
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 495 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 334
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 333 IQFHL 319
+ L
Sbjct: 483 QMYKL 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,888,031
Number of Sequences: 237096
Number of extensions: 1699585
Number of successful extensions: 4350
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4350
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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