Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_J02
         (512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   2.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   2.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    22   2.4  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   4.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   4.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   4.6  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   6.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   6.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 21.8 bits (44), Expect(2) = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 387 NNNNDTSSNIR*NNHL 434
           NNNN  SSN   NN L
Sbjct: 210 NNNNTISSNNNNNNSL 225



 Score = 20.6 bits (41), Expect(2) = 2.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 381 DKNNNNDTSSN 413
           + NNNN++SSN
Sbjct: 199 NSNNNNNSSSN 209


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 21.8 bits (44), Expect(2) = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 387 NNNNDTSSNIR*NNHL 434
           NNNN  SSN   NN L
Sbjct: 210 NNNNTISSNNNNNNSL 225



 Score = 20.6 bits (41), Expect(2) = 2.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 381 DKNNNNDTSSN 413
           + NNNN++SSN
Sbjct: 199 NSNNNNNSSSN 209


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 21.8 bits (44), Expect(2) = 2.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 387 NNNNDTSSNIR*NNHL 434
           NNNN  SSN   NN L
Sbjct: 162 NNNNTISSNNNNNNSL 177



 Score = 20.6 bits (41), Expect(2) = 2.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 381 DKNNNNDTSSN 413
           + NNNN++SSN
Sbjct: 151 NSNNNNNSSSN 161


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = -1

Query: 452 NKLCCF*MVILSDIATG--VIIVVFVK*Q-HRMHASFVNCMTFLLIQ*LSVKKRDLKY 288
           NK+C F +V+L + A G   +++ FVK Q H    S +      L Q L +    +K+
Sbjct: 20  NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA--FLTQTLCIDDTTVKF 75


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 68  LLHSTHSQGNIAAIAG 21
           LLH  HS GN+ A  G
Sbjct: 762 LLHEPHSVGNVTATEG 777


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 234 NQKVINAPYNNTFAMFCQ*IYILLMVR 154
           +Q+ +  PY+  F +FC     LL  R
Sbjct: 348 DQEKVKVPYDRHFLLFCMVYTTLLQAR 374


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 101 PLRKCREIQTCLL 63
           PLRKCR   TC L
Sbjct: 141 PLRKCRNKSTCEL 153


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 101 PLRKCREIQTCLL 63
           PLRKCR   TC L
Sbjct: 142 PLRKCRNKSTCEL 154


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 387 NNNNDTSSNIR*NNHLKT 440
           NNNN+++S+   NNH+ +
Sbjct: 156 NNNNNSNSSSSCNNHVSS 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,441
Number of Sequences: 2352
Number of extensions: 8919
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)