Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J02
(512 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 1.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 4.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 5.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 5.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 5.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 5.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.9
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.9
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 118 VGLWIRL*ENVERYKRVYCTPLIPR 44
+G WI + E + R++ + + L PR
Sbjct: 128 MGSWISIQEQIPRFRHIGPSTLFPR 152
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 273 YFFICLSDI*V*NNQKVINAPYNNTFAMFC 184
Y F+ + +N VIN +N MFC
Sbjct: 75 YIFLSTKSLRTPSNLFVINLAISNFLMMFC 104
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NHQ*NVNSLTKHSKSIVIRSINYL 228
N+ N N+ KH+ + + +INY+
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 41 FPGNEWSAVN 70
FP N W A+N
Sbjct: 306 FPSNSWVAIN 315
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 497 SARIKVIYGFCNICWNKLCC 438
S R ++ +G CN WN C
Sbjct: 91 SMRSELPWGSCNNYWNTKNC 110
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 41 FPGNEWSAVN 70
FP N W A+N
Sbjct: 274 FPSNSWVAIN 283
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 86 YIFSEAYPKPYTS*K 130
YI++ YP PY+ K
Sbjct: 55 YIYNPRYPLPYSGSK 69
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,233
Number of Sequences: 438
Number of extensions: 2850
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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