Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J01
(550 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 25 0.44
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 1.8
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 22 4.1
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 5.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.1
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 9.4
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 9.4
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 25.0 bits (52), Expect = 0.44
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 246 IQVGLMIDPPQVPPKSNACGN 184
+QVG D P VPP CG+
Sbjct: 685 LQVGTHADLPPVPPNFPTCGD 705
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 203 FGGTCGGSIISPTWILTA 256
FG TCGGS S ++ +A
Sbjct: 20 FGSTCGGSSSSMAYLKSA 37
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 234 LMIDPPQVPPKSNACGNLSC 175
L+ D P P S ACG+ +C
Sbjct: 110 LITDEPLCPDGSLACGDGNC 129
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 222 PPQVPPKSNACGNLSCT 172
PPQ PP + NL T
Sbjct: 195 PPQAPPFATVGANLQAT 211
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 138 AGTNNNNSKSG 148
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 296 AGTNNTNDDSG 328
AGTNN N SG
Sbjct: 182 AGTNNNNSKSG 192
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 20.6 bits (41), Expect = 9.4
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -1
Query: 439 EVPFCSYLFNVELISIKPI 383
E+P+C +FN+ ++ +
Sbjct: 386 EIPYCGKIFNLTTRQVRTL 404
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 256 WSLYTVHQRPVCVSRHQQYKRRQWC 330
W+ T+ + + +SR Q Y R C
Sbjct: 479 WAETTIIPKVLAMSRDQNYLYRMTC 503
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,095
Number of Sequences: 336
Number of extensions: 2695
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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