Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_J01
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 37 0.011
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 31 0.41
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 31 0.72
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 29 1.7
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 29 2.2
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ... 29 2.9
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 3.9
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 27 8.9
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 27 8.9
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 27 8.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 215 CGGSIISPTWILTAGHCTLFTSGRYVLA---GTNNTNDDSGVMRSVKRLVIHPLFSVG 379
CGGS+I P ++LTA HC F R + SG V + IHP +++G
Sbjct: 84 CGGSLIDPNFVLTAAHC--FAKDRRPTSYSVRVGGHRSGSGSPHRVTAVSIHPWYNIG 139
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 206 GGTCGGSIISPTWILTAGHCTLFTSGR-YVLAGTNNTNDDSGVMRSVKRLVIH 361
G CG ++I W++TA HC L R +V N + SVK IH
Sbjct: 63 GILCGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSF--SVKEAYIH 113
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 218 GGSIISPTWILTAGHCTLFTSG-RYVLAGTNN-TNDDSGVMRSVKRL 352
GGSIISP I+TA H + T G R L N +S + RS+K L
Sbjct: 43 GGSIISPYHIITAAHGFITTIGSRGNLCENKNWKKPNSSIYRSIKFL 89
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +2
Query: 215 CGGSIISPTWILTAGHC---TLFTSGRYVLAG--TNNTNDDSGVMRSVKRLVIHPLF 370
CG SI+ T ++TA HC S V+ G NN D + + ++R+ +PL+
Sbjct: 54 CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY 110
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 170 AVHERFPHALLFGGTCGGSIISPTWILTAGHC 265
+V RFP CGG +I+P+ ++T+ HC
Sbjct: 33 SVITRFPDGTT--NVCGGVLIAPSIVITSAHC 62
>AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = -2
Query: 243 QVGLMIDPPQVPPKSNACGNLSCTALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGP 64
Q+ PPQ PP+SN+ S +LE+ VF + + F ++ A
Sbjct: 151 QLAEQAPPPQTPPRSNSLKVASSRSLETPSMMRVFSDSMYETPVQIQRRFTKAQAKAEAE 210
Query: 63 AHAHAMS-ATATETVNC 16
A A A S + +T C
Sbjct: 211 AEAPAKSPGSKAQTTKC 227
>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 836 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 888
>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 800 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 852
>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 839 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 891
>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 836 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 888
>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 800 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 852
>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 171 ALESDFSTTVFCSTAGLLLISDNFCFVCRRSLAPGPAHAHAMSATATETVNCL 13
+L +DFS T F LLL+ FC+ +L+ H + +T +C+
Sbjct: 839 SLAADFSITQFSHVCRLLLVHGRFCYKRSCALSQFVMHRGLIISTMQAIFSCV 891
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 212 TCGGSIISPTWILTAGHC 265
TC G+I+SP IL A HC
Sbjct: 192 TCTGTIVSPRHILIATHC 209
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 215 CGGSIISPTWILTAGHC 265
C G++ SP ILTA HC
Sbjct: 75 CSGTLTSPRHILTATHC 91
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 212 TCGGSIISPTWILTAGHCTLFTSGRYVLAGTNNTNDDSGVM 334
TC G+++SP+ +LT+ C T + D S M
Sbjct: 46 TCTGTLLSPSVVLTSSKCFPDTRKNLIAQAIIKKKDSSATM 86
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 164 SRAVHERFPHALLFGGTCGGSIIS-PT 241
SR +HER P+A++ G GSI++ PT
Sbjct: 530 SRKIHERRPNAIVVGVDPNGSILTGPT 556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,757,673
Number of Sequences: 27780
Number of extensions: 264081
Number of successful extensions: 718
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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