Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I24
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   1.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 33  SQYIPSQVTGYAASGPTS 86
           S  IP ++ GYA  GP S
Sbjct: 136 SAVIPQEIAGYADEGPLS 153


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 7   GWLQRSVHSRNTYRPRSPVMLLLDLHHGLVICSLLRASRYG 129
           GWL       NT  P S    L  + H  +I +L   S YG
Sbjct: 6   GWLTPPHSLGNTVTPVSLRFKLYTIVHIFIIIALYAHSSYG 46


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 141 SWSLLKQLISGDYPDLLTLV 200
           SW +L  L+ G YP  L  V
Sbjct: 11  SWLILLSLLLGLYPSYLQTV 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,050
Number of Sequences: 336
Number of extensions: 3285
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)