Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I23
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   2.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 127 PNFNGFVCNTLFASGYLCRF-VAFSQTNCDF 38
           P  NG VC T+ A G+ C     F   NC+F
Sbjct: 346 PCQNGGVCTTIHA-GHKCTCPEGFYGKNCEF 375



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 127 PNFNGFVCNTLFASGYLCRFVAFSQ-TNCD 41
           P  NG VC      GY+C   + +  TNC+
Sbjct: 384 PCQNGGVCRISDGGGYICDCPSGTNGTNCE 413


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +3

Query: 78  RYPLAKRVLQTKPLKLGQLG*RAFKPNTLSLSAIWFV 188
           ++ +   +++  PL  GQLG   F     +L   W +
Sbjct: 418 KWRVRSAIIEYMPLLAGQLGREFFDEKLNALCMTWLM 454


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 61  RPQNDKDIRWQK 96
           R +N KD+ WQK
Sbjct: 460 RGKNAKDVDWQK 471


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 126 LILMALSVIPFLPADIFVVLW 64
           LI++ALS        +F +LW
Sbjct: 269 LIMLALSYTVIQEVMLFTILW 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,783
Number of Sequences: 336
Number of extensions: 1793
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)