Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I20
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 246 5e-66
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 246 5e-66
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 246 5e-66
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 246 5e-66
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 246 5e-66
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 246 5e-66
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 245 9e-66
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 245 9e-66
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 245 9e-66
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 245 9e-66
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 227 3e-60
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 141 2e-34
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 111 1e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 63 5e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 1e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 1e-07
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 34 0.037
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 29 1.1
Z70209-1|CAA94146.1| 183|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 27 5.7
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 27 5.7
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 26 7.5
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 26 7.5
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 9.9
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 26 9.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 117 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 176
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 177 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 236
Query: 370 N 372
N
Sbjct: 237 N 237
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 147 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 206
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 207 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 266
Query: 370 N 372
N
Sbjct: 267 N 267
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 246 bits (601), Expect = 5e-66
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 245 bits (599), Expect = 9e-66
Identities = 114/121 (94%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 245 bits (599), Expect = 9e-66
Identities = 114/121 (94%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 245 bits (599), Expect = 9e-66
Identities = 114/121 (94%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (599), Expect = 9e-66
Identities = 114/121 (94%), Positives = 119/121 (98%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
ALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET Y
Sbjct: 221 ALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSY 280
Query: 370 N 372
N
Sbjct: 281 N 281
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 227 bits (554), Expect = 3e-60
Identities = 104/120 (86%), Positives = 112/120 (93%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYV
Sbjct: 160 THTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYV 219
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
A DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y
Sbjct: 220 AHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTY 279
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 141 bits (341), Expect = 2e-34
Identities = 62/120 (51%), Positives = 84/120 (70%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+
Sbjct: 164 THICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYI 223
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 369
A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E ++
Sbjct: 224 AYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLF 283
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 111 bits (268), Expect = 1e-25
Identities = 56/119 (47%), Positives = 74/119 (62%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+
Sbjct: 164 THAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYL 223
Query: 190 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETV 366
ALD T + S++ SY LPD I I N FR PE LF+P +G E G+ V
Sbjct: 224 ALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVV 277
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 63.3 bits (147), Expect = 5e-11
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = +1
Query: 10 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 189
+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV
Sbjct: 182 THCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
Query: 190 ALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGME 342
D +E T K DG IT +G ERF PE F P F E
Sbjct: 242 CPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPE 298
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +1
Query: 19 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYV 189
VP+ +GY + AI + + + D L L+ Y+F + E+ I+R E+ YV
Sbjct: 335 VPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYV 394
Query: 190 ALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHE 360
D+++E + T SL+ P Q I N RF C E LF+P G+++ G+H+
Sbjct: 395 PEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQ 454
Query: 361 TVY 369
++
Sbjct: 455 LIH 457
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 52.0 bits (119), Expect = 1e-07
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 22/133 (16%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETV 366
+ ++ CG+ E V
Sbjct: 281 DIDIDQCGVAEAV 293
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 52.0 bits (119), Expect = 1e-07
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 22/133 (16%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETV 366
+ ++ CG+ E V
Sbjct: 281 DIDIDQCGVAEAV 293
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +1
Query: 1 ARGSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 120
A + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 250 YELPDGQVITIGNERFRCPEALFQPSFLGME 342
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 153 FPLSGGGERVAPLSEDLHEVVGQVASSQVQTEDGVGQGVTFVDGH 19
F L+GG + DL + G++ ++V E G+ Q + F+D +
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z70209-1|CAA94146.1| 183|Caenorhabditis elegans Hypothetical
protein K02D3.1 protein.
Length = 183
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = +2
Query: 314 SSSPRSWVWNR-AASTRPS 367
S PR WVWNR A T PS
Sbjct: 50 SIQPRDWVWNRDAVLTAPS 68
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 26.6 bits (56), Expect = 5.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 335 PKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAV-AISCSKSRAT*QSFSLMSR 159
PK G K G++ SLP + S D + + E++ V +I+ T SR
Sbjct: 418 PKQRGRKSTRGRKKTSLPRGASTFKDESVDDNNDDESSKVDSINFDDDDDTATEKDAESR 477
Query: 158 TISLSAVVVNE*P 120
S+ VVNE P
Sbjct: 478 AESVQPEVVNEEP 490
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 26.6 bits (56), Expect = 5.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 335 PKNEGWKRASGQRNLSLPMVIT*PSGSSYDFSREVEAAAV-AISCSKSRAT*QSFSLMSR 159
PK G K G++ SLP + S D + + E++ V +I+ T SR
Sbjct: 418 PKQRGRKSTRGRKKTSLPRGASTFKDESVDDNNDDESSKVDSINFDDDDDTATEKDAESR 477
Query: 158 TISLSAVVVNE*P 120
S+ VVNE P
Sbjct: 478 AESVQPEVVNEEP 490
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 357 VDAARFHTQERGLEESFGATEPLVTDGDHLTVGKF 253
VD + ER +ESF P+ DG+++ + KF
Sbjct: 86 VDDMEIYQTERWSKESFSYDVPISEDGEYVIILKF 120
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 26.6 bits (56), Expect = 5.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 44 CPTPSSVWTW 73
CP PSS+W+W
Sbjct: 864 CPIPSSIWSW 873
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 148 REIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL-PDGQVITIGNE 291
RE++ E LC A++ ++E+ STS+ + PDG + +G E
Sbjct: 108 RELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGFELALGTE 156
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 11 LTPCPSTKVTPCPTPSS 61
+ P P+TKV CP+P+S
Sbjct: 192 IRPLPTTKVGQCPSPTS 208
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 257 FPTVR*SPSVTRGSVAPKLSSSPRSWVW 340
F TVR +P+++ G+ + P+S VW
Sbjct: 3260 FETVRLAPTISEGAFIDWVKKEPQSIVW 3287
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 257 FPTVR*SPSVTRGSVAPKLSSSPRSWVW 340
F TVR +P+++ G+ + P+S VW
Sbjct: 3260 FETVRLAPTISEGAFIDWVKKEPQSIVW 3287
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 257 FPTVR*SPSVTRGSVAPKLSSSPRSWVW 340
F TVR +P+++ G+ + P+S VW
Sbjct: 3260 FETVRLAPTISEGAFIDWVKKEPQSIVW 3287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,103,904
Number of Sequences: 27780
Number of extensions: 144656
Number of successful extensions: 484
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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