BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I19
(536 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 2.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 2.1
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 25 2.1
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 24 3.7
AY745206-1|AAU93473.1| 91|Anopheles gambiae cytochrome P450 pr... 23 4.9
AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15 prot... 23 8.6
AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative odorant-b... 23 8.6
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.6 bits (51), Expect = 2.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 8 RHEGEDKDGHVAMLFNKSEQDIKNNQQAFITSLH 109
R G+D DGH+ F E D + N F L+
Sbjct: 2616 RSYGDDPDGHLDYRFTGQEWDEETNLYNFHARLY 2649
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.6 bits (51), Expect = 2.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 8 RHEGEDKDGHVAMLFNKSEQDIKNNQQAFITSLH 109
R G+D DGH+ F E D + N F L+
Sbjct: 2617 RSYGDDPDGHLDYRFTGQEWDEETNLYNFHARLY 2650
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.6 bits (51), Expect = 2.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 528 SPARRNQPAWRLACSAW 478
SPA R +P WR A W
Sbjct: 235 SPAHRRKPRWRRAGRRW 251
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 23.8 bits (49), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 329 PQMLQQYLQT---PPAGMDMRLWKQAQADNP 412
P + Q+ QT P A M+ WK+ + +NP
Sbjct: 83 PPPINQFTQTLDKPTAQQVMKCWKKYRPENP 113
>AY745206-1|AAU93473.1| 91|Anopheles gambiae cytochrome P450
protein.
Length = 91
Score = 23.4 bits (48), Expect = 4.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 335 MLQQYLQTPPAGMDMRLWKQAQADNPDPDNYIP 433
M ++Y P M R QA N DPD Y P
Sbjct: 18 MDEKYFPEPEVYMPQRF--DEQAPNYDPDAYYP 48
>AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15
protein.
Length = 250
Score = 22.6 bits (46), Expect = 8.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 68 DIKNNQQAFITSLHSLLGNKPN 133
+I+ N+Q +T +H+LL + N
Sbjct: 35 EIRVNEQLVLTCMHTLLAREHN 56
>AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative
odorant-binding protein OBPjj2 protein.
Length = 228
Score = 22.6 bits (46), Expect = 8.6
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 50 FNKSEQDIKNNQQAFITSLHSLLGNKPNLA-VNIESIKAVS 169
F++++ DIK Q+ TS L G + N+A +N+ I +S
Sbjct: 7 FDEAQNDIKAVQKRLSTSSTILSGIQKNMAHLNLLQIGVLS 47
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,124
Number of Sequences: 2352
Number of extensions: 11096
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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