Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I18
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q9Y6 Cluster: ENSANGP00000011738; n=5; Culicidae|Rep:...    36   0.53 
UniRef50_A2SIL3 Cluster: Signal transduction protein; n=1; Methy...    33   2.8  
UniRef50_Q5K9K5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_Q1GK76 Cluster: Transcriptional regulator HxlR family; ...    32   6.5  
UniRef50_Q5DG05 Cluster: SJCHGC02558 protein; n=1; Schistosoma j...    31   8.6  
UniRef50_Q5KK85 Cluster: Cytochrome c oxidase biogenesis-related...    31   8.6  

>UniRef50_Q7Q9Y6 Cluster: ENSANGP00000011738; n=5; Culicidae|Rep:
           ENSANGP00000011738 - Anopheles gambiae str. PEST
          Length = 238

 Score = 35.5 bits (78), Expect = 0.53
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +1

Query: 286 EDGVKRLVALNVCYVACEGVPENIEIVGAKWKNVYDVLMYCDTKFDVFDYLGKD 447
           ++G   +  +N+ YV+ +   E  +  G+ W+ +YD++ Y   K +V++  G D
Sbjct: 92  KEGSDEIAGMNMLYVSQQSDKEEYQCKGSVWRCIYDLVDYTIKKANVYERYGVD 145


>UniRef50_A2SIL3 Cluster: Signal transduction protein; n=1;
           Methylibium petroleiphilum PM1|Rep: Signal transduction
           protein - Methylibium petroleiphilum (strain PM1)
          Length = 965

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 7   GYKRRKELKVKTNQMSSRYWMNRTRYLHKWQQVVKCGSSRL---LRKHDNHQILTD 165
           G  R++ L+++ + + ++  +N T +  +W ++ + GSSR    +R HD H+I  D
Sbjct: 182 GLTRKQLLRLRVHDIDTQ--VNETSWPQRWHEMCERGSSRFETNVRHHDGHEIPVD 235


>UniRef50_Q5K9K5 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 361

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = -2

Query: 416 LVSQYIR----TSYTFFHFAPTISMFSGTPSHA-T*QTLRATSLFTPSSWI*QPEAHVTV 252
           L+ QY+R    T    +  A T S F   PSH  +  T ++ + FTP SW+ +  A  TV
Sbjct: 86  LLEQYLRSILNTKSHLWRSAYTFSDFLSIPSHTGSSSTQKSGTKFTPQSWLLEHAALQTV 145

Query: 251 SRTPYSHIPRR 219
            R+  S + +R
Sbjct: 146 LRSARSALLKR 156


>UniRef50_Q1GK76 Cluster: Transcriptional regulator HxlR family;
           n=12; Proteobacteria|Rep: Transcriptional regulator HxlR
           family - Silicibacter sp. (strain TM1040)
          Length = 123

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 280 IQEDGVKRLVALNVCYVACEGVPENIEIVGAKW 378
           ++EDG  R  A NVC   C  +   + I+G KW
Sbjct: 5   VEEDGTGRRQAYNVCLEPC-AIERGMRIIGGKW 36


>UniRef50_Q5DG05 Cluster: SJCHGC02558 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC02558 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 221

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +3

Query: 156 FDGHCANEVLCNITNLIDDRRASGYVRVWRPTYGNMSLXLLYPRGWGKETGRSQRLLRG 332
           FD   ANE+ C++   I  +    ++   R  + N S+ L YP+G  KE  + Q+++ G
Sbjct: 163 FDKRRANEIACDLLAQIKMKEQQNFLEKQRNDFLNESV-LSYPKGSSKEANK-QKVVEG 219


>UniRef50_Q5KK85 Cluster: Cytochrome c oxidase biogenesis-related
           protein, putative; n=2; Filobasidiella neoformans|Rep:
           Cytochrome c oxidase biogenesis-related protein,
           putative - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 461

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = -3

Query: 385 HSSILHPQSRCFQVLLRTPRSKR*ERPVSLPHPLGYNNXRLMLP*VGRHTRTYPDALRSS 206
           H  +L P S     L+  P S   E  +S+PHPLGY    ++L  + R   T P +L   
Sbjct: 91  HEPLLQPASTFLDPLIH-PLS---EALLSIPHPLGYGTTLILLTVIVRTAFTLPVSLWQK 146

Query: 205 MR 200
            R
Sbjct: 147 KR 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,910,219
Number of Sequences: 1657284
Number of extensions: 10067550
Number of successful extensions: 24260
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24258
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)