Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I18
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.19 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.19 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   5.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 7   GYKRRKELKVKTNQMSSRYWMNRTRYLHKWQQVVKCGSSRLLRKHDNHQILTDTVPMKSS 186
           G+     L+V T     RY   R R ++ +  V  C +   ++ HD   I TD  P+   
Sbjct: 326 GFMTNTPLEVFTITPGRRY---RFRMINSFASV--CPAQLTIQGHDLTLIATDGEPVHPV 380

Query: 187 AI*QISSMTGER 222
            +  I S +GER
Sbjct: 381 RVNTIISFSGER 392


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 7   GYKRRKELKVKTNQMSSRYWMNRTRYLHKWQQVVKCGSSRLLRKHDNHQILTDTVPMKSS 186
           G+     L+V T     RY   R R ++ +  V  C +   ++ HD   I TD  P+   
Sbjct: 326 GFMTNTPLEVFTITPGRRY---RFRMINSFASV--CPAQLTIQGHDLTLIATDGEPVHPV 380

Query: 187 AI*QISSMTGER 222
            +  I S +GER
Sbjct: 381 RVNTIISFSGER 392


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 103 LAAIYVDSGYDSSSILNSFDLFSLL 29
           +AAI  D+ YD  ++ N  D+ +++
Sbjct: 175 VAAIPTDAAYDVPAMSNVLDVINVM 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,068
Number of Sequences: 336
Number of extensions: 2454
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)