Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I18
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 31 0.38
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 31 0.38
Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical pr... 30 0.88
AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine re... 28 3.6
Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 27 4.7
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 27 4.7
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 27 4.7
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 27 4.7
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 27 8.2
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 27 8.2
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 27 8.2
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 31.1 bits (67), Expect = 0.38
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 52 SSRYWMNRTRYLHKWQQVVKC-GSSRLLRKHDNHQILTDTVPMKSS 186
+S +W+ T+ L W+ + C GSSR L K+ IL M SS
Sbjct: 513 TSGFWVCSTKTLSSWKNAICCLGSSRSLPKYQPADILYAKSDMSSS 558
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 31.1 bits (67), Expect = 0.38
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 52 SSRYWMNRTRYLHKWQQVVKC-GSSRLLRKHDNHQILTDTVPMKSS 186
+S +W+ T+ L W+ + C GSSR L K+ IL M SS
Sbjct: 513 TSGFWVCSTKTLSSWKNAICCLGSSRSLPKYQPADILYAKSDMSSS 558
>Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical
protein T26H2.5 protein.
Length = 229
Score = 29.9 bits (64), Expect = 0.88
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 431 SNTSNLVSQYIRTSYTFFH--FAPTISMFSGTPSHAT*Q-TLRATSLFTPSSW 282
SNTS+ S Y RT Y FH F + + S A + RA SLF S W
Sbjct: 38 SNTSHSASSYTRTVYVTFHKTFEKKVVSMDFSESTAFEDISRRARSLFPGSDW 90
>AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine
receptor, class x protein102 protein.
Length = 319
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 124 WMTHISPLAAIYVDSGYDSSSILNSFDLFSLLIPSV 17
W++ I + +VDS +D + FD+FS L+ V
Sbjct: 245 WLSAIDSINITFVDSNFDKAIFKFLFDIFSNLMTPV 280
>Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical
protein F40G12.4 protein.
Length = 264
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +1
Query: 334 CEGVPENIEIVGAKWKNVY-----DVLMYCDTKFDVFDYLGKD 447
CEG+P ++EI+ + KN + VL+ ++ FD+L KD
Sbjct: 19 CEGIPFHLEILSDRTKNCFFKFFESVLLKENSCSRNFDFLAKD 61
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 28 LKVKTNQMSSRYWMNRTRYLHKWQQVVKCGSSRLLRKHDNH 150
L+ TN + RY +N R+ H W V G +H+ H
Sbjct: 182 LRYTTNSPTERYLLNAARFRHIWLGFV--GEQENESRHEQH 220
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 156 FDGHCANEVL--CNITNLIDDRRASGYVRVWRPTY 254
+D + A+E L CN++N RA+ ++V++PTY
Sbjct: 486 YDVNSADEGLYYCNVSNKYGINRATNRLQVFKPTY 520
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 156 FDGHCANEVL--CNITNLIDDRRASGYVRVWRPTY 254
+D + A+E L CN++N RA+ ++V++PTY
Sbjct: 486 YDVNSADEGLYYCNVSNKYGINRATNRLQVFKPTY 520
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 156 FDGHCANEVL--CNITNLIDDRRASGYVRVWRPTY 254
+D + A+E L CN++N RA+ ++V++PTY
Sbjct: 486 YDVNSADEGLYYCNVSNKYGINRATNRLQVFKPTY 520
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 246 PTYGNMSLXLLYPRGWGKETG 308
P M LLY RGWGK G
Sbjct: 296 PCENTMDRPLLYTRGWGKTLG 316
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 228 YVRVWRPTYGNMSLXLL 278
YVR+W PT N++L L
Sbjct: 84 YVRIWNPTVANLTLMAL 100
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 228 YVRVWRPTYGNMSLXLL 278
YVR+W PT N++L L
Sbjct: 84 YVRIWNPTVANLTLMAL 100
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 246 PTYGNMSLXLLYPRGWGKETG 308
P M LLY RGWGK G
Sbjct: 296 PCENTMDRPLLYTRGWGKTLG 316
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 246 PTYGNMSLXLLYPRGWGKETG 308
P M LLY RGWGK G
Sbjct: 232 PCENTMDRPLLYTRGWGKTLG 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,207,054
Number of Sequences: 27780
Number of extensions: 244429
Number of successful extensions: 683
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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