Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I18
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   0.87 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.1  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.1  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 296 TPSSWI*QPEAHVTVSRTPYSHIPRRSPVIDE 201
           T +SW   PEAH++V++     IP  S ++D+
Sbjct: 152 TEASWH-SPEAHISVAQKLQKEIP-NSIILDQ 181


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +2

Query: 323 ATWRAKEYLKTSRLWVQNGRMYTTSLCTATLNSTCSI 433
           ATW   +      LW          +CTA++ + C+I
Sbjct: 123 ATWEVFKVWIFGDLWCSIWLAVDVWMCTASILNLCAI 159


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 367 PQSRCFQVLLRTPRSKR*ERPVSLPHPLGYNNXRLMLP*VGRHTRTYPD 221
           P     Q LLR  + +R ER    PH       R++ P +  +  T  D
Sbjct: 162 PTPTTVQQLLRRAQIRRNERRTPDPHDETAKKPRVLSPPLNNNDATPTD 210


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 186 RGLHWHSVRQNLMVVMFPE 130
           +G  W SV  + M V+FPE
Sbjct: 1   QGGDWGSVIASDMAVLFPE 19


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 374 NGRMYTTSLCTATLNSTCSI 433
           N +    S C +  N+TCSI
Sbjct: 155 NDKPIPASCCNSPENNTCSI 174


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 331 ACEGVPENIEIVGAK 375
           +C+ VP N+E +G++
Sbjct: 78  SCDPVPGNLEQIGSR 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,751
Number of Sequences: 438
Number of extensions: 2925
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)