Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I15
(459 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 0.69
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 0.91
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 8.5
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.5
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.5
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 0.69
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Frame = +3
Query: 63 SETNSTYNEQTTSSVAKS--NVATEITSQTELSSL--AIETSDQKPHETDLAA--KERKM 224
SE+ Q VAK+ NV + ++ L + A +Q P+ T KERK
Sbjct: 738 SESEFEMYHQQLQGVAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKETTPKKERKT 797
Query: 225 STSDPFLTSSRISSPGSEVITVSKPTSDNDNAFENIETTAIILTPLSS 368
+T+ + SSR SE ++ + + T I TP +S
Sbjct: 798 ATTTQPVISSRKEQKKSEEKNINDHCVTTEQSVVVTNVTTTINTPTTS 845
Score = 24.2 bits (50), Expect = 0.69
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +3
Query: 48 QETSLSETNSTYNEQTTSSVAKSNVATEIT----SQTELSSLAIE 170
Q ++ +T N TTS ++ S IT S T ++S+ +E
Sbjct: 828 QSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSITVE 872
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.8 bits (49), Expect = 0.91
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 388 ESVAVSDELNGVKIIAVVSIFSNALSLSDVGFDTVITSDPGDDIRE 251
+ +A EL+G+K IF ALS D+ D + P RE
Sbjct: 356 DPLASKYELHGLKFQWTDGIFGMALSPVDIHDDRTLFFHPMSSFRE 401
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 316 LSLSDVGFDTVITSDPGDDIRELVRKGSE 230
LSL D+ + + GD +R L+++G E
Sbjct: 719 LSLEDLVRFSTLEGSGGDSLRTLLQRGQE 747
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 6.4
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +3
Query: 180 QKPHETDLAAKERKMSTSDPFLTSSRISSPGSEVITVSKPTSDNDNAFENIETTAIILTP 359
Q+ E + +KM I GSE P S + + NI T I+
Sbjct: 46 QQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNISKTVILSDK 105
Query: 360 LSSSE 374
L SS+
Sbjct: 106 LESSD 110
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 33 ETDRLQETSLSETNSTYNEQ 92
E + LQ + + E+NS N+Q
Sbjct: 446 EEESLQGSKIKESNSCSNDQ 465
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 208 AAKSVSCGF*SLVSMANELSSVCDVIS 128
AA + S G +V+M N+L + DV++
Sbjct: 425 AAHTDSSGAMKIVNMLNQLYTAFDVLT 451
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.5
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +3
Query: 180 QKPHETDLAAKERKMSTSDPFLTSSRISSPGSEVITVSKPTSDNDNAFENIETTAIILTP 359
Q+ E + +KM I GSE P S + ++ N T I+
Sbjct: 46 QQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSSTSNTSKTVILSNK 105
Query: 360 LSSSE 374
L SS+
Sbjct: 106 LESSD 110
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 93 TTSSVAKSNVATEITSQTELSSLAIET 173
+T+ +NVAT +TS + S I+T
Sbjct: 724 STAGQFPTNVATTVTSMSIDQSTVIQT 750
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 208 AAKSVSCGF*SLVSMANELSSVCDVIS 128
AA + S G +V+M N+L + DV++
Sbjct: 425 AAHTDSSGAVKIVNMLNQLYTAFDVLT 451
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,971
Number of Sequences: 438
Number of extensions: 2078
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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