Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I14
         (457 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U0H2 Cluster: Putative uncharacterized protein PFD058...    34   1.7  
UniRef50_A0BU14 Cluster: Chromosome undetermined scaffold_128, w...    33   3.8  
UniRef50_Q22ZD6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_Q54YY6 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  

>UniRef50_Q9U0H2 Cluster: Putative uncharacterized protein PFD0585c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFD0585c - Plasmodium falciparum (isolate 3D7)
          Length = 1928

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -2

Query: 186  NHVVEPLKKKHV*NILNNF*HKHEKLHS*IMIFS*YRSYNLFLLIFIPLVT 34
            N ++  +   H  N +N+F  KHEK+ + + IF    SY+L+ LIFI L+T
Sbjct: 1292 NILINNISNSH--NFINDFYQKHEKILT-LDIFYKNISYSLYFLIFINLLT 1339


>UniRef50_A0BU14 Cluster: Chromosome undetermined scaffold_128, whole
            genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_128, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2907

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +1

Query: 100  LRVKLFMLMLEIIQNVLNVFFF*RFYNMVPKHNTNLPDNKFKLYVNQVLMSNGYYRLDYY 279
            +R+      LEI++N+ N +   +  N+      NL  NK K+Y NQ   S     L +Y
Sbjct: 2243 MRIYAVNSQLEIVRNLTNTYCELQINNLNSSQQQNLSLNKNKIYFNQSTFSYNLDDLIFY 2302

Query: 280  V 282
            +
Sbjct: 2303 I 2303


>UniRef50_Q22ZD6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 737

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 11/39 (28%), Positives = 25/39 (64%)
 Frame = +1

Query: 172 FYNMVPKHNTNLPDNKFKLYVNQVLMSNGYYRLDYYVND 288
           F ++ PK  T L  NKF++Y+++++      ++ +Y+N+
Sbjct: 577 FLHLTPKTITALSQNKFEVYLHKLIFQIDLEKISHYINN 615


>UniRef50_Q54YY6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 332

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 193 HNTNLPDNKFKLYVNQVLMSNGYYRLDYYVNDRDVWK 303
           +N N PDN+     N   ++ GY  +DYY N  D+++
Sbjct: 273 NNYNNPDNENNFNYNNTHINRGYSNVDYYNNSVDLFE 309


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,406,141
Number of Sequences: 1657284
Number of extensions: 8164349
Number of successful extensions: 15805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15804
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)