Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I14
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   5.1  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   5.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    22   8.9  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 413 ETRSGFLFKIFCSKYNIK 360
           +T  GF+ ++FC  + IK
Sbjct: 131 KTTDGFMLRVFCIGFTIK 148


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 181 MVPKHNTNLPDNKF 222
           ++PKH +NLPD  F
Sbjct: 446 ILPKHASNLPDVSF 459


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 96  LSTSEAFHAYVRNYSKCFKRVFFLKV 173
           LS +EAF  ++R+  +    +FF KV
Sbjct: 349 LSKNEAFDRFLRSIREDVTGIFFRKV 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,802
Number of Sequences: 2352
Number of extensions: 8506
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)