Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I13
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.20 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 129  NRCIFP*KIRVC 94
            NRC FP KIR+C
Sbjct: 1113 NRCFFPSKIRIC 1124


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +3

Query: 78  EHFMRYILLFFTEKYIYCL--YIMFIRT 155
           E  ++ +L+FF E  +YC   Y++ + T
Sbjct: 60  EIHIKIVLMFFKEASLYCFNYYVIVVTT 87


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 262 KLSLANYVAAFLLNRNLTVTVDRSPFRDG 348
           K+S+    A   LN+++T T  + P R G
Sbjct: 328 KISVIQDDAQMRLNKHVTTTYPKQPLRFG 356


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 325 RQSPSNFYSVRKPLHSLLSSIYFN 254
           R S +NF+  R  L +L   I+F+
Sbjct: 173 RLSAANFFGARHGLETLNQLIWFD 196


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -2

Query: 240 PLSATPLRAVSL*RECQISRSNASHYAKE 154
           P  ATP R V       I R     YA+E
Sbjct: 16  PYDATPARIVCYFSNWAIYRPGIGRYAQE 44


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 185  RAQMPRITRKSAYKHNVKTIDVFFRKK 105
            R  +  + R +  K  + T+DV F+K+
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKR 1441


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 185  RAQMPRITRKSAYKHNVKTIDVFFRKK 105
            R  +  + R +  K  + T+DV F+K+
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKR 1441


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 185  RAQMPRITRKSAYKHNVKTIDVFFRKK 105
            R  +  + R +  K  + T+DV F+K+
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKR 1441


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 185  RAQMPRITRKSAYKHNVKTIDVFFRKK 105
            R  +  + R +  K  + T+DV F+K+
Sbjct: 1415 RKTIHNLERAAQKKRQIGTLDVAFKKR 1441


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 83  LYAIHTLIFYGKIHLLSLHYVY 148
           ++ IH L +   I LL ++Y Y
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFY 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,878
Number of Sequences: 336
Number of extensions: 2373
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)