Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I13
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p pro...    33   0.37 
AE013599-1827|AAF58292.2|  443|Drosophila melanogaster CG13016-P...    33   0.37 
AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ...    29   4.5  

>AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p
           protein.
          Length = 443

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 30  LIQKNTNHFNQSL*F*EHFMRYILLFF-TEKYIYCLYIMFIRTLSRNARHL 179
           L Q +T H   ++   + ++RY+LL   T + IYCL ++ IR  +  +RHL
Sbjct: 81  LPQAHTRHM-VNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHL 130


>AE013599-1827|AAF58292.2|  443|Drosophila melanogaster CG13016-PA
           protein.
          Length = 443

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 30  LIQKNTNHFNQSL*F*EHFMRYILLFF-TEKYIYCLYIMFIRTLSRNARHL 179
           L Q +T H   ++   + ++RY+LL   T + IYCL ++ IR  +  +RHL
Sbjct: 81  LPQAHTRHM-VNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHL 130


>AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ,
           isoform J protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 90  RYILLFFTE-KYIYCLYIMFIRTLSRNARHLSAKFDIRVIVKPRVTGSR*AGYYC 251
           +Y+  FF   +++Y L+   IR  +RN R      D+R +V+   T      Y+C
Sbjct: 329 KYVPRFFNHARFLYKLHSKSIRNRNRNNRKPHIDADVREMVRRNFTNEYEFYYFC 383


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,823,925
Number of Sequences: 53049
Number of extensions: 341946
Number of successful extensions: 559
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)