Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I12
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 31 0.009
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 31 0.009
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 31 0.009
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 24 1.4
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 2.4
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 4.1
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.5
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 9.6
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 9.6
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.6
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 31.1 bits (67), Expect = 0.009
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 359 MADSVFFLYFTYEMHRQFLQHDKVIELLSDPKETFDAVVLEWFFSEINAGIP 514
++D++F + +Q D +++ DPK + WFF ++ + IP
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIP 178
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 31.1 bits (67), Expect = 0.009
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 359 MADSVFFLYFTYEMHRQFLQHDKVIELLSDPKETFDAVVLEWFFSEINAGIP 514
++D++F + +Q D +++ DPK + WFF ++ + IP
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIP 178
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 31.1 bits (67), Expect = 0.009
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 359 MADSVFFLYFTYEMHRQFLQHDKVIELLSDPKETFDAVVLEWFFSEINAGIP 514
++D++F + +Q D +++ DPK + WFF ++ + IP
Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIP 178
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 ICLALWMLVVSSEALRIL-VVFPIPSKSH-SILGQGVV 187
+CLA W +VS+ L + + PI H +LG +V
Sbjct: 391 VCLAFWSFIVSTILLWFINKIIPIRMSIHDELLGADLV 428
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 2.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 126 ESLSYFLYHQKVIAYLAKALLQGYC-KRDMR*STLHLSREKNQWQI*QK*MYHQS 287
+ LSYF + AY A+ L GY +++ + L++++ Q QI K + Q+
Sbjct: 207 QQLSYFTQDIGLAAYYAQVNLAGYIQEQNQQQQQQPLTQQQYQQQIVGKYLQQQA 261
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 522 KRCGIPAFISEKNHSNTTASNVSLG--SLSNSITL 424
K C + +KN +N N++L S SN +T+
Sbjct: 93 KNCNAGSLTVKKNFANKYCGNITLNIESTSNKMTV 127
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 578 SLKLANVLPLNPTI 537
SL L ++LPLNP +
Sbjct: 3 SLSLKDILPLNPKL 16
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 141 FLYHQKVIAYLAKALLQGYC 200
+LYH K + Y++K L C
Sbjct: 113 WLYHDKTLLYMSKLTLVLSC 132
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 498 ISEKNHSNTTASNVSLGSLSNSITLSCCKNCL 403
+SE + +V G+L N +++C CL
Sbjct: 46 MSEHGTTQAQIDDVDKGNLVNEPSITCYMYCL 77
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 498 ISEKNHSNTTASNVSLGSLSNSITLSCCKNCL 403
+SE + +V G+L N +++C CL
Sbjct: 46 MSEHGTTQAQIDDVDKGNLVNEPSITCYMYCL 77
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 395 EMHRQFLQHDKVIELL 442
E H FL+H ++++L
Sbjct: 108 EKHASFLKHSNIVKVL 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,083
Number of Sequences: 438
Number of extensions: 3897
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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