Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I11
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 32 0.043
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 30 0.13
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 29 0.31
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 28 0.53
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 28 0.53
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 2.2
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 3.8
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 25 5.0
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 24 8.7
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 24 8.7
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 24 8.7
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 31.9 bits (69), Expect = 0.043
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 79 VPYRESKLTRLLGPGLSG 132
+PYRESKLTRLL LSG
Sbjct: 410 IPYRESKLTRLLQQSLSG 427
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 79 VPYRESKLTRLLGPGLSG 132
+PYRESKLTRLL L G
Sbjct: 371 IPYRESKLTRLLQDSLGG 388
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 29.1 bits (62), Expect = 0.31
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +1
Query: 64 TDSII--VPYRESKLTRLLGPGLSG 132
TDS + VPYR+SKLTR+L L G
Sbjct: 268 TDSKLSHVPYRDSKLTRILKESLGG 292
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 28.3 bits (60), Expect = 0.53
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 79 VPYRESKLTRLLGPGLSG 132
VPYR+SKLTRLL L G
Sbjct: 339 VPYRDSKLTRLLKFSLGG 356
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 28.3 bits (60), Expect = 0.53
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 79 VPYRESKLTRLLGPGLSG 132
VPYR+SKLTRLL L G
Sbjct: 340 VPYRDSKLTRLLKFSLGG 357
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 26.2 bits (55), Expect = 2.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 178 RRVQRHHHAHPLATPPRSALARAVGSTST 92
R +Q+ A PLATPPR L G++ +
Sbjct: 350 RAIQQATAAEPLATPPRHPLNATNGTSQS 378
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 3.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 79 VPYRESKLTRLLGPGLSG 132
+PYR SKLT LL L G
Sbjct: 757 IPYRNSKLTNLLQYSLGG 774
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 131 GRSGEGVSMVVTLNPASRYANETKHVLSLAAVAQDLQINNTVLTST 268
GR + + +T+ PASR +E L +VAQ N V S+
Sbjct: 259 GRLESVLLLALTMEPASRLGSEADAKAWLDSVAQKYAARNGVTLSS 304
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 24.2 bits (50), Expect = 8.7
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 76 IVPYRESKLTRLL 114
I+P+R+SKLT LL
Sbjct: 340 IIPFRQSKLTELL 352
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 293 SPLAYCYRMSTSVPCYLFVDPVRLRPETARAWSRSR 186
S LAY + MS V + + P+ +AW+ SR
Sbjct: 860 SGLAYGFNMSIDVDGGVLYYCINTSPDVYKAWASSR 895
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 24.2 bits (50), Expect = 8.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 264 DVSTVLFICRSCA 226
+ STVLF+CR C+
Sbjct: 583 EASTVLFVCRVCS 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,543,807
Number of Sequences: 5004
Number of extensions: 27166
Number of successful extensions: 117
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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