BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I10
(597 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 24 4.3
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 24 4.3
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 7.5
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 9.9
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 23 9.9
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.8 bits (49), Expect = 4.3
Identities = 10/49 (20%), Positives = 26/49 (53%)
Frame = -2
Query: 170 SKTNPTFYYSKTKFGHLNTYNIVVYLYYETLKRYYEKQHK*LNLRSPRK 24
++ P ++Y HL+ + Y T + YY +++K +++++ R+
Sbjct: 1034 NRDQPQYFYVAEICNHLSPKSTFPGSNYATFEEYYHRKYK-IHIQNQRQ 1081
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.8 bits (49), Expect = 4.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -1
Query: 462 PRREGTSRTHLPPDVSST**RLDDNSGCVSKSHALAPF*VENAVSRP 322
P+R+ R+ S + DD+SG V ++ A+ P + RP
Sbjct: 36 PQRQQVQRSDSDSSSSESSQSSDDDSGSVERNPAIQPVGIFGRPGRP 82
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 504 GKGSIVSPLRL*SVPRREGTSRTHLP 427
G G PL+ ++PR G HLP
Sbjct: 827 GSGGFRVPLQQLALPRNRGGLNLHLP 852
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 570 APGTTKSSE-YLKDDDNSCSVSKGKGSI 490
A TT +SE + DDD+ V G GS+
Sbjct: 801 ARSTTGASERFTSDDDDDLLVHGGTGSV 828
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 22.6 bits (46), Expect = 9.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 452 SLRGTLYSLSGDTIEPLPFDTEQLLSSSFKYSDDLVVPG 568
+L G + + SGDTI P +S +F+ L +PG
Sbjct: 124 TLVGDIMAQSGDTILPREECDRLNISYAFENGTALEIPG 162
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,849
Number of Sequences: 2352
Number of extensions: 14420
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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