BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I10
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126356-1|AAI26357.1| 1115|Homo sapiens eukaryotic translation ... 74 3e-13
BC126354-1|AAI26355.1| 1116|Homo sapiens eukaryotic translation ... 74 3e-13
AF284615-1|AAF91480.1| 1115|Homo sapiens initiation factor 2-alp... 74 3e-13
AF193339-1|AAF61199.1| 1115|Homo sapiens eukaryotic translation ... 74 3e-13
AF110146-1|AAD19961.1| 1115|Homo sapiens eukaryotic translation ... 74 3e-13
AC104134-2|AAY24331.1| 970|Homo sapiens unknown protein. 46 1e-04
EF560739-1|ABQ59049.1| 926|Homo sapiens ERN2 protein protein. 44 5e-04
EF560720-1|ABQ59030.1| 874|Homo sapiens ERN2 protein protein. 44 5e-04
BC130407-1|AAI30408.1| 977|Homo sapiens endoplasmic reticulum t... 44 5e-04
BC130405-1|AAI30406.1| 977|Homo sapiens endoplasmic reticulum t... 44 5e-04
AK131280-1|BAD18455.1| 974|Homo sapiens protein ( Homo sapiens ... 44 5e-04
AF059198-1|AAC25991.1| 977|Homo sapiens protein kinase/endoribo... 44 5e-04
AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum t... 44 5e-04
AB047079-1|BAB21297.1| 925|Homo sapiens protein kinase/ribonucl... 44 5e-04
AC062029-1|AAY14777.1| 146|Homo sapiens unknown protein. 38 0.027
AB057443-1|BAB63374.1| 529|Homo sapiens testis specific ZFP91 p... 31 4.1
AB056107-1|BAB63373.1| 570|Homo sapiens zinc finger protein hom... 31 4.1
BC051743-1|AAH51743.1| 569|Homo sapiens zinc finger protein 91 ... 30 5.4
AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein. 30 5.4
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein. 30 5.4
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein. 30 5.4
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein. 30 5.4
AK075536-1|BAC11679.1| 529|Homo sapiens protein ( Homo sapiens ... 30 5.4
AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain p... 30 5.4
>BC126356-1|AAI26357.1| 1115|Homo sapiens eukaryotic translation
initiation factor 2-alpha kinase 3 protein.
Length = 1115
Score = 74.1 bits (174), Expect = 3e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVELTSGGKWVRLVPS 454
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E+ G K + +PS
Sbjct: 99 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPEVF-GNKMI--IPS 155
Query: 455 LRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
L G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 156 LDGALFQWDRDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 204
>BC126354-1|AAI26355.1| 1116|Homo sapiens eukaryotic translation
initiation factor 2-alpha kinase 3 protein.
Length = 1116
Score = 74.1 bits (174), Expect = 3e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVELTSGGKWVRLVPS 454
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E+ G K + +PS
Sbjct: 100 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPEVF-GNKMI--IPS 156
Query: 455 LRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
L G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 157 LDGALFQWDRDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 205
>AF284615-1|AAF91480.1| 1115|Homo sapiens initiation factor 2-alpha
kinase 3 protein.
Length = 1115
Score = 74.1 bits (174), Expect = 3e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVELTSGGKWVRLVPS 454
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E+ G K + +PS
Sbjct: 99 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPEVF-GNKMI--IPS 155
Query: 455 LRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
L G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 156 LDGALFQWDRDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 204
>AF193339-1|AAF61199.1| 1115|Homo sapiens eukaryotic translation
initiation factor 2 alpha kinase PEK protein.
Length = 1115
Score = 74.1 bits (174), Expect = 3e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVELTSGGKWVRLVPS 454
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E+ G K + +PS
Sbjct: 99 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPEVF-GNKMI--IPS 155
Query: 455 LRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
L G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 156 LDGALFQWDRDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 204
>AF110146-1|AAD19961.1| 1115|Homo sapiens eukaryotic translation
initiation factor 2 alpha kinase PEK protein.
Length = 1115
Score = 74.1 bits (174), Expect = 3e-13
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVELTSGGKWVRLVPS 454
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E+ G K + +PS
Sbjct: 99 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPEVF-GNKMI--IPS 155
Query: 455 LRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
L G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 156 LDGALFQWDRDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 204
>AC104134-2|AAY24331.1| 970|Homo sapiens unknown protein.
Length = 970
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +2
Query: 443 LVPSLRGTLYSLSGD--TIEPLPFDTEQLLSSSFKYSDDLVVPGARETLWFGL 595
++PSL G L+ D ++E +PF E LL SS+K+ DD+V+ G + +GL
Sbjct: 7 IIPSLDGALFQWDQDRESMETVPFTVESLLESSYKFGDDVVLVGGKSLTTYGL 59
>EF560739-1|ABQ59049.1| 926|Homo sapiens ERN2 protein protein.
Length = 926
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYS 475
+L++VSTLDG L A S Q G W L P++ ++ E+ L G+LY
Sbjct: 39 NLLLVSTLDGSLHALSKQTGDLKWTLRDDPVIEGPMYVTEMAF------LSDPADGSLYI 92
Query: 476 LSGDT---IEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWF 589
L + LPF +L+ +S + SD + G ++ WF
Sbjct: 93 LGTQKQQGLMKLPFTIPELVHASPCRSSDGVFYTGRKQDAWF 134
>EF560720-1|ABQ59030.1| 874|Homo sapiens ERN2 protein protein.
Length = 874
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYS 475
+L++VSTLDG L A S Q G W L P++ ++ E+ L G+LY
Sbjct: 39 NLLLVSTLDGSLHALSKQTGDLKWTLRDDPVIEGPMYVTEMAF------LSDPADGSLYI 92
Query: 476 LSGDT---IEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWF 589
L + LPF +L+ +S + SD + G ++ WF
Sbjct: 93 LGTQKQQGLMKLPFTIPELVHASPCRSSDGVFYTGRKQDAWF 134
>BC130407-1|AAI30408.1| 977|Homo sapiens endoplasmic reticulum to
nucleus signaling 1 protein.
Length = 977
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +2
Query: 299 LVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYSL 478
L+ VSTLDG L A S + G+ W L+ P+L H E L G+LY+L
Sbjct: 32 LLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAF------LPDPNDGSLYTL 85
Query: 479 ---SGDTIEPLPFDTEQLLSSS-FKYSDDLVVPGARETLWF 589
+ + + LPF +L+ +S + SD ++ G ++ +W+
Sbjct: 86 GSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWY 126
>BC130405-1|AAI30406.1| 977|Homo sapiens endoplasmic reticulum to
nucleus signaling 1 protein.
Length = 977
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +2
Query: 299 LVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYSL 478
L+ VSTLDG L A S + G+ W L+ P+L H E L G+LY+L
Sbjct: 32 LLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAF------LPDPNDGSLYTL 85
Query: 479 ---SGDTIEPLPFDTEQLLSSS-FKYSDDLVVPGARETLWF 589
+ + + LPF +L+ +S + SD ++ G ++ +W+
Sbjct: 86 GSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWY 126
>AK131280-1|BAD18455.1| 974|Homo sapiens protein ( Homo sapiens
cDNA FLJ16228 fis, clone FEBRA2008692, highly similar
to Homo sapiens IRE1b mRNA for protein
kinase/ribonuclease IRE1 beta. ).
Length = 974
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYS 475
+L++VSTLDG L A S Q G W L P++ ++ E+ L G+LY
Sbjct: 87 NLLLVSTLDGSLHALSKQTGDLKWTLRDDPVIEGPMYVTEMAF------LSDPADGSLYI 140
Query: 476 LSGDT---IEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWF 589
L + LPF +L+ +S + SD + G ++ WF
Sbjct: 141 LGTQKQQGLMKLPFTIPELVHASPCRSSDGVFYTGRKQDAWF 182
>AF059198-1|AAC25991.1| 977|Homo sapiens protein
kinase/endoribonulcease protein.
Length = 977
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +2
Query: 299 LVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYSL 478
L+ VSTLDG L A S + G+ W L+ P+L H E L G+LY+L
Sbjct: 32 LLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAF------LPDPNDGSLYTL 85
Query: 479 ---SGDTIEPLPFDTEQLLSSS-FKYSDDLVVPGARETLWF 589
+ + + LPF +L+ +S + SD ++ G ++ +W+
Sbjct: 86 GSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWY 126
>AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum to
nucleus signalling 1 isoform 1 variant protein.
Length = 1006
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +2
Query: 299 LVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYSL 478
L+ VSTLDG L A S + G+ W L+ P+L H E L G+LY+L
Sbjct: 61 LLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAF------LPDPNDGSLYTL 114
Query: 479 ---SGDTIEPLPFDTEQLLSSS-FKYSDDLVVPGARETLWF 589
+ + + LPF +L+ +S + SD ++ G ++ +W+
Sbjct: 115 GSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWY 155
>AB047079-1|BAB21297.1| 925|Homo sapiens protein
kinase/ribonuclease IRE1 beta protein.
Length = 925
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSLRGTLYS 475
+L++VSTLDG L A S Q G W L P++ ++ E+ L G+LY
Sbjct: 39 NLLLVSTLDGSLHALSKQTGDLKWTLRDDPVIEGPMYVTEMAF------LSDPADGSLYI 92
Query: 476 LSGDT---IEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWF 589
L + LPF +L+ +S + SD + G ++ WF
Sbjct: 93 LGTQKQLGLMKLPFTIPELVHASPCRSSDGVFYTGRKQDAWF 134
>AC062029-1|AAY14777.1| 146|Homo sapiens unknown protein.
Length = 146
Score = 37.9 bits (84), Expect = 0.027
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 284 PVYNDLVIVSTLDGRLTAFSTQN-GAKAWDLE--TQPLLSSNLHHVE 415
P LVI+STLDGR+ A +N G K WDL+ + L+SS+L E
Sbjct: 100 PRGRSLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLSKPE 146
>AB057443-1|BAB63374.1| 529|Homo sapiens testis specific ZFP91
protein.
Length = 529
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 594 KPNHNVSRAPGTTKSSEYLKDD-DNSCSVSKGKGSIVSPLRL*SVPRREGTSRTHLPPDV 418
+P V+ AP T SS L+ D + + + VS R PRR +S + PPDV
Sbjct: 32 RPPEAVAAAPAGTTSSRVLRGGRDRGRAAAAAAAAAVSRRRKAEYPRRRRSSPSARPPDV 91
>AB056107-1|BAB63373.1| 570|Homo sapiens zinc finger protein
homologous to mouse Zfp91 protein.
Length = 570
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 594 KPNHNVSRAPGTTKSSEYLKDD-DNSCSVSKGKGSIVSPLRL*SVPRREGTSRTHLPPDV 418
+P V+ AP T SS L+ D + + + VS R PRR +S + PPDV
Sbjct: 32 RPPEAVAAAPAGTTSSRVLRGGRDRGRAAAAAAAAAVSRRRKAEYPRRRRSSPSARPPDV 91
>BC051743-1|AAH51743.1| 569|Homo sapiens zinc finger protein 91
homolog (mouse), ciliary neurotrophic factor transcripti
protein.
Length = 569
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 594 KPNHNVSRAPGTTKSSEYLKDD-DNSCSVSKGKGSIVSPLRL*SVPRREGTSRTHLPPDV 418
+P ++ AP T SS L+ D + + + VS R PRR +S + PPDV
Sbjct: 32 RPPEAIAAAPAGTTSSRVLRGGRDRGRAAAAAAAAAVSRRRKAEYPRRRRSSPSARPPDV 91
>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
Length = 1575
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 185 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 237
>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
Length = 1587
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 185 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 237
>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
Length = 1587
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 185 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 237
>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
Length = 1619
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 229 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 281
>AK075536-1|BAC11679.1| 529|Homo sapiens protein ( Homo sapiens
cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to
Laminin gamma-3 chain precursor. ).
Length = 529
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 185 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 237
>AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain
precursor protein.
Length = 1587
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 QKLPFCNPSNAKDSPVYNDLVIVSTLDGRLTAFSTQN--GAKAWDLETQPLLS 394
+++ FC + SP+ V STL+GR +A++ + G + W T+ L+S
Sbjct: 185 ERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,011,622
Number of Sequences: 237096
Number of extensions: 1978580
Number of successful extensions: 3769
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3764
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -