Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I10
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 64 7e-11
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 64 7e-11
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 59 2e-09
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 29 3.3
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 29 3.3
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 28 5.8
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 28 5.8
AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related... 27 7.7
AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related ... 27 7.7
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVE-LTSGGKWVRLVPSLRGTLY 472
+++I +TLDG +TA + G W E PLL L + + GG ++L+P+L G L+
Sbjct: 54 NIIITATLDGVVTALDGETGEMIWRYEDAPLLRGTLSTSDPIDIGGTSLQLMPTLDGRLF 113
Query: 473 SLSGDT--IEPLPFDTEQLLSSSFKYSDDLVVPGARET 580
S + +T IEPLP T+ LL S+ + D V G T
Sbjct: 114 SYTHNTNLIEPLPITTDSLLESTIRLGQDAVAGGKSVT 151
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVE-LTSGGKWVRLVPSLRGTLY 472
+++I +TLDG +TA + G W E PLL L + + GG ++L+P+L G L+
Sbjct: 54 NIIITATLDGVVTALDGETGEMIWRYEDAPLLRGTLSTSDPIDIGGTSLQLMPTLDGRLF 113
Query: 473 SLSGDT--IEPLPFDTEQLLSSSFKYSDDLVVPGARET 580
S + +T IEPLP T+ LL S+ + D V G T
Sbjct: 114 SYTHNTNLIEPLPITTDSLLESTIRLGQDAVAGGKSVT 151
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVE-LTSGGKWVRLVPSLRGTLY 472
+++I +TLDG +TA + G W E PLL L + + GG ++L+P+L G L+
Sbjct: 54 NIIITATLDGVVTALDGETGEMIWRYEDAPLLRGTLSTSDPIDIGGTSLQLMPTLDGRLF 113
Query: 473 SLSGDT--IEPLPFDTEQLLSSSFKYSDDLVVPGARET 580
S + +T IEPLP T+ LL S+ + D V G T
Sbjct: 114 SYTHNTNLIEPLPITTDSLLESTIRLGQDAVAGGKSVT 151
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 296 DLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVE-LTSGGKWVRLVPSLRGTLY 472
+++I +TLDG +TA + G W E PLL L + + GG ++L+P+L G L+
Sbjct: 54 NIIITATLDGVVTALDGETGEMIWRYEDAPLLRGTLSTSDPIDIGGTSLQLMPTLDGRLF 113
Query: 473 SLSGDT--IEPLPFDTEQLLSSSFKYSDDLVVPGARET 580
S + +T IEPLP T+ LL S+ + D V G T
Sbjct: 114 SYTHNTNLIEPLPITTDSLLESTIRLGQDAVAGGKSVT 151
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 278 DSPVYNDLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSL 457
D + ++VST+DGRL A ++ G W L+ +P+L S + G + L L
Sbjct: 37 DEEKTSSTILVSTIDGRLRALDSETGEIKWTLQEEPVLRS---PSAVKQG--FTFLPNPL 91
Query: 458 RGTLYSLSGDTIEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWFGL 595
G+LY L +++ LPF+ QL+ +S K +D ++ G+++ +WFG+
Sbjct: 92 DGSLYVLKNSSLKKLPFNIPQLVHASPCKGNDGILYAGSKKDVWFGI 138
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 278 DSPVYNDLVIVSTLDGRLTAFSTQNGAKAWDLETQPLLSSNLHHVELTSGGKWVRLVPSL 457
D + ++VST+DGRL A ++ G W L+ +P+L S + G + L L
Sbjct: 37 DEEKTSSTILVSTIDGRLRALDSETGEIKWTLQEEPVLRS---PSAVKQG--FTFLPNPL 91
Query: 458 RGTLYSLSGDTIEPLPFDTEQLL-SSSFKYSDDLVVPGARETLWFGL 595
G+LY L +++ LPF+ QL+ +S K +D ++ G+++ +WFG+
Sbjct: 92 DGSLYVLKNSSLKKLPFNIPQLVHASPCKGNDGILYAGSKKDVWFGI 138
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = -1
Query: 216 QTKKVSANAAFKAITLQN--QSDILL*QNEIRT--SQHL*YCCLFIL-RNFEKILRETTQ 52
Q K A A TL++ QS + L +N++R+ +Q + CL +L + FEKILR+T
Sbjct: 68 QRVKQIALADIVRFTLRDDLQSLVRLTENQLRSRATQEIVPICLLVLNKKFEKILRKTDS 127
Query: 51 I 49
I
Sbjct: 128 I 128
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = -1
Query: 216 QTKKVSANAAFKAITLQN--QSDILL*QNEIRT--SQHL*YCCLFIL-RNFEKILRETTQ 52
Q K A A TL++ QS + L +N++R+ +Q + CL +L + FEKILR+T
Sbjct: 68 QRVKQIALADIVRFTLRDDLQSLVRLTENQLRSRATQEIVPICLLVLNKKFEKILRKTDS 127
Query: 51 I 49
I
Sbjct: 128 I 128
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -3
Query: 271 IRWITKW*LLHSIVGT*ITNEESKRERGLQSDHPPKPIRHFIIAKRNSDISTPIILLFIY 92
+ W W + +I G+ I + K R D P+R F+I S ++TP +L Y
Sbjct: 4 LSWGRGWYAIQTISGSVI--QYLKEARDKPPDELVWPLRLFLILLGYSTVATPAAILIYY 61
Query: 91 ITK 83
+ +
Sbjct: 62 VRR 64
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -3
Query: 271 IRWITKW*LLHSIVGT*ITNEESKRERGLQSDHPPKPIRHFIIAKRNSDISTPIILLFIY 92
+ W W + +I G+ I + K R D P+R F+I S ++TP +L Y
Sbjct: 4 LSWGRGWYAIQTISGSVI--QYLKEARDKPPDELVWPLRLFLILLGYSTVATPAAILIYY 61
Query: 91 ITK 83
+ +
Sbjct: 62 VRR 64
>AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
b protein.
Length = 548
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +2
Query: 143 YNKMSDWFWRVIALKAAFALTFF-VCNLRAD---DAVQ 244
YN+++ FW++I + F L FF V N +++ DAVQ
Sbjct: 272 YNRLATVFWKIIDIFEIFGLNFFSVKNGKSEKFQDAVQ 309
>AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
a protein.
Length = 660
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +2
Query: 143 YNKMSDWFWRVIALKAAFALTFF-VCNLRAD---DAVQ 244
YN+++ FW++I + F L FF V N +++ DAVQ
Sbjct: 272 YNRLATVFWKIIDIFEIFGLNFFSVKNGKSEKFQDAVQ 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,347,323
Number of Sequences: 27780
Number of extensions: 300223
Number of successful extensions: 810
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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