Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I10
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.3
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 5.3
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 6.9
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 6.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 6.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 9.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 9.2
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 212 RRK*ARTRPSKRSPSKTNPTFYYSKTKFGHLNTYNIVVYLYY 87
RR+ R++ K S +N Y + + + N YN LYY
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYY 111
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 5.3
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 140 CYNKMSDWFWRV 175
C N+M+ W+W +
Sbjct: 359 CQNEMNKWWWNM 370
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 22 FLRGLRRLSYLCCFS*YLFKV 84
F RGL SYL C+ +++ V
Sbjct: 207 FNRGLLSASYLVCYGIWVYFV 227
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 485 DTIEPLPFDTEQLLSS 532
+ ++PLPF E +SS
Sbjct: 40 EEVDPLPFGVENTISS 55
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 22 FLRGLRRLSYLCCFS*YLFKV 84
F RGL SYL C+ +++ V
Sbjct: 83 FNRGLLSASYLVCYGIWVYFV 103
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 68 NIFSKFRNINKQQYYR 115
N+F KF ++ K Y++
Sbjct: 461 NMFKKFASLKKSPYFK 476
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 68 NIFSKFRNINKQQYYR 115
N+F KF ++ K Y++
Sbjct: 461 NMFKKFASLKKSPYFK 476
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,392
Number of Sequences: 438
Number of extensions: 3949
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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