Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I09
(383 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 136 8e-34
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 130 7e-32
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 128 2e-31
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 121 4e-29
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 106 1e-24
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 91 5e-20
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 87 1e-18
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 73 1e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 2e-14
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 65 4e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 57 1e-09
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 55 3e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 46 3e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 45 4e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 43 2e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 42 3e-05
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 41 8e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 40 1e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 38 5e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 36 0.002
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 34 0.007
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 31 0.082
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 27 0.76
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 26 2.3
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 25 3.1
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 25 3.1
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 24 7.1
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 24 7.1
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 24 7.1
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 24 7.1
SPAP27G11.12 |||human down-regulated in multiple cancers-1 homol... 24 9.4
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 24 9.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 24 9.4
SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr 2... 24 9.4
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 24 9.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 24 9.4
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 136 bits (330), Expect = 8e-34
Identities = 65/121 (53%), Positives = 88/121 (72%)
Frame = +2
Query: 11 KFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 190
+F + TIGVEF TR I + +KIK QIWDTAGQER+RA+T +YYRGA GAL+VYDIT
Sbjct: 34 EFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIT 93
Query: 191 RRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEAS 370
++S+++++ WL + R + + VI L+GNK+DL R V+ EEA+ FA EN L F+E S
Sbjct: 94 KQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETS 153
Query: 371 A 373
A
Sbjct: 154 A 154
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 130 bits (314), Expect = 7e-32
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = +2
Query: 35 TIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 214
TIG++F R IE+ G++IKLQIWDTAGQERFR +T +YYRGA G L++YD+T + +++++
Sbjct: 41 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNV 100
Query: 215 SSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAKT 379
+W ++ + + LIGNK D + QR V++E+ + ADE G+ F+EASAKT
Sbjct: 101 RTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKT 155
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 128 bits (310), Expect = 2e-31
Identities = 64/123 (52%), Positives = 88/123 (71%), Gaps = 6/123 (4%)
Frame = +2
Query: 32 HTIGVEFGTRIIEVA----GQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRS 199
HT+G++F +RII V ++IKLQIWDTAGQE+FR+V R+YYRGAAGA++VYD+T +
Sbjct: 40 HTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKD 99
Query: 200 TYNHLSSWLTDTRNLTNPSTV-IFLIGNKSDLDGQRDVTYEEAKQFADENGLMFV-EASA 373
++ LSSWL+D R + PST+ + L G+KSDL QR V+ EEA +F E + E S+
Sbjct: 100 SFEELSSWLSDIRAMA-PSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSS 158
Query: 374 KTG 382
TG
Sbjct: 159 YTG 161
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 121 bits (291), Expect = 4e-29
Identities = 55/114 (48%), Positives = 76/114 (66%)
Frame = +2
Query: 35 TIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 214
TIGV+F R E+ G+ +KLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++
Sbjct: 40 TIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNV 99
Query: 215 SSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAK 376
WL + L+GNKSD+ ++ V Y AK+FAD + F+E SAK
Sbjct: 100 KQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAK 153
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 106 bits (254), Expect = 1e-24
Identities = 48/116 (41%), Positives = 77/116 (66%)
Frame = +2
Query: 35 TIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 214
TIG++F ++ + + + ++LQ+WDTAGQERFR++ SY R ++ A++VYDIT +++ +
Sbjct: 43 TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT 102
Query: 215 SSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAKTG 382
W+ D R +I L+GNK+DL +R VT EE ++ A E +M +E SAK G
Sbjct: 103 EKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAG 158
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 91.1 bits (216), Expect = 5e-20
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +2
Query: 35 TIGVEFGTRIIEV-AGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 211
TIG F T+ + + +KL+IWDTAGQER++++ YYR A A++VYDIT+ ++
Sbjct: 46 TIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK 105
Query: 212 LSSWLTDTRNLTNPSTVIFLIGNKSDL-DGQRDVTYEEAKQFADENGLMFVEASAKT 379
SW+ + + VI L GNK DL +R V +A+ +A E L+F E SAKT
Sbjct: 106 AKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKT 162
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 86.6 bits (205), Expect = 1e-18
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Frame = +2
Query: 8 RKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDI 187
RKF D TIG +F T+ + V + + LQ+WDTAGQERF+++ ++YRGA ++VYD+
Sbjct: 31 RKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDV 90
Query: 188 TRRSTYNHLSSWLTD---TRNLTNPSTVIF-LIGNKSDLDGQ-RDVTYEEAKQFADENG- 349
++ L SW + + +NP T F L+GNK D++ Q R V+ +A F G
Sbjct: 91 NNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGE 150
Query: 350 LMFVEASAK 376
+ + E SAK
Sbjct: 151 IPYFETSAK 159
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 73.3 bits (172), Expect = 1e-14
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +2
Query: 68 EVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLT 247
E+ G+ L + DTAGQE + A+ Y R G L+VY+IT RS+++ +S++ +
Sbjct: 50 EIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVK 109
Query: 248 NPSTV-IFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAK 376
+ T + L+ NK DL+ +R V+ E +Q A ++VE SAK
Sbjct: 110 DKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAK 153
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.9 bits (171), Expect = 2e-14
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Frame = +2
Query: 8 RKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDI 187
+KF + TIG +F T+ + V + + LQ+WDTAGQERF+++ ++YRGA ++VY++
Sbjct: 31 QKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNV 90
Query: 188 TRRSTYNHLSSWLTDTRNLTNPSTVIF---LIGNKSDLD-GQRDVTYEEAKQFADE---N 346
+++ + +W + T+ F ++GN+ D D +R V+ A + +
Sbjct: 91 NNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYCKSKHGS 150
Query: 347 GLMFVEASAK 376
++ EASAK
Sbjct: 151 NMIHFEASAK 160
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 64.9 bits (151), Expect = 4e-12
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +2
Query: 65 IEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNL 244
I+ GQ+ +I DTAGQ+ + + + G G ++VY IT +S++ + N
Sbjct: 47 IKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNH 106
Query: 245 TNPSTV-IFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAK 376
T V I ++GNKSDL QR VT EE K A+E + EASA+
Sbjct: 107 TGTEWVPIVVVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASAR 151
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 56.8 bits (131), Expect = 1e-09
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = +2
Query: 14 FMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 193
F + T+GV F + I + +I IWD GQ F + A L ++D++R
Sbjct: 35 FDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSR 94
Query: 194 RSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSD 289
+ST N + W R N + V LIG K D
Sbjct: 95 KSTLNSIKEWYRQARGF-NKTAVPILIGTKYD 125
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 55.2 bits (127), Expect = 3e-09
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 35 TIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYY-RGAAGALMVYDITRRSTYNH 211
T+GVE +I +WDTAGQE+ + YY +G G +M +D+T R TY +
Sbjct: 41 TLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIM-FDVTSRITYKN 99
Query: 212 LSSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAKT 379
+ W D + + I L GNK D+ +R V +A F + L + + SAK+
Sbjct: 100 VPHWWRDLVRVCE-NIPIVLCGNKVDVK-ERKVK-AKAITFHRKKNLQYYDISAKS 152
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 45.6 bits (103), Expect = 3e-06
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Frame = +2
Query: 86 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDTRNLTNPSTV 262
I+L +WDTAGQE + + Y + L+ + I ++ N+++ W + ++ P T
Sbjct: 64 IELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFC-PRTP 122
Query: 263 IFLIGNKSDL------------DGQRDVTYEEAKQFADENGLMFVEASAK 376
I L+G K+DL G VTY++A+ A +VE SAK
Sbjct: 123 IVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAK 172
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 45.2 bits (102), Expect = 4e-06
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 65 IEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDI-TRRSTYNHLSSWLTDTRN 241
I V G I+L +WDTAGQE + + Y ++ + + +R S N ++ WL + +
Sbjct: 54 IFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSS 113
Query: 242 LTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGL 352
P + L+ K DL G + + +K E GL
Sbjct: 114 -NCPGVKLVLVALKCDLRGADEEQVDHSKIIDYEEGL 149
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 42.7 bits (96), Expect = 2e-05
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 71 VAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDTRNLT 247
V G+ ++L +WDTAGQE + + Y A L+ + I + ++S+ W+ + L
Sbjct: 51 VDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC 110
Query: 248 NPSTVIFLIGNKSDLDGQRDVTYEEAKQ 331
P+ L+G K+DL V EE ++
Sbjct: 111 -PNVPFILVGMKADLRSD-PVAIEEMRR 136
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 42.3 bits (95), Expect = 3e-05
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Frame = +2
Query: 65 IEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDI-TRRSTYNHLSSWLTDTRN 241
+EV G+ I+L +WDTAGQE + + Y + L+ + + S N W+++ +
Sbjct: 47 VEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLH 106
Query: 242 LTNPSTVIFLIGNKSDL------------DGQRDVTYEEAKQFADENG-LMFVEASAK 376
+ + I L+G K DL Q+ +T+EE + A + G ++E SAK
Sbjct: 107 FCS-NLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAK 163
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 40.7 bits (91), Expect = 8e-05
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Frame = +2
Query: 65 IEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLTDTRN 241
+EV G+ ++L +WDTAGQE + + Y + L+ + + + +++ W+++ +
Sbjct: 47 VEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLH 106
Query: 242 LTNPSTVIFLIGNKSDL------------DGQRDVTYEEAKQFADENG-LMFVEASAKT 379
+ S I L+ K+DL Q VT EE + A + G ++E SAKT
Sbjct: 107 FCS-SLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKT 164
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 40.3 bits (90), Expect = 1e-04
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +2
Query: 53 GTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD 232
G + V + IK +WD GQ++ R + R Y+ G G + V D + N +S +
Sbjct: 54 GFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVD---SADSNRISEARQE 110
Query: 233 TRNLTNP----STVIFLIGNKSDLDG 298
+ + ++ ++ NK DL G
Sbjct: 111 LHRIISDREMRDCLLLVLANKQDLPG 136
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 37.9 bits (84), Expect = 5e-04
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +2
Query: 53 GTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD 232
G + V + I +WD GQ++ R + R Y++ G + V D R + L
Sbjct: 50 GFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQR 109
Query: 233 TRNLTNPSTVIFLI-GNKSDL 292
N + L+ NK DL
Sbjct: 110 MLNEDELRDALLLVFANKQDL 130
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.9 bits (79), Expect = 0.002
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +2
Query: 50 FGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY----DITRRSTYNHLS 217
F R +EV G ++ IWD GQ+ R ++Y+ + V D+ N L
Sbjct: 50 FQIRTLEVEG--LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
Query: 218 SWLTDTRNLTNPSTVIFLIGNKSDLDG 298
L + + L T I ++ NKSD+ G
Sbjct: 108 ELLVEEKLL---FTSILVLANKSDVSG 131
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 34.3 bits (75), Expect = 0.007
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Frame = +2
Query: 5 TRKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYD 184
T KF +D T+ + ++ + + L ++DTAGQE + + Y L+ +
Sbjct: 25 TNKFPSDYVPTVFDNYAVTVM-IGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFS 83
Query: 185 ITRRSTYNHL-SSWLTDTRNLTNPSTVIFLIGNKSDL------------DGQRDVTYEEA 325
+T +++ ++ W + + P ++G + DL Q +T+E+
Sbjct: 84 VTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQG 142
Query: 326 KQFADENG-LMFVEASAKT 379
++ A E G + +VE SA T
Sbjct: 143 ERLARELGAVKYVECSALT 161
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 30.7 bits (66), Expect = 0.082
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Frame = +2
Query: 92 LQIWDTAGQERFR----AVTRSY-YRGAAGALMVYDITRRSTYNHLSSW--LTDTRNLTN 250
L +WD GQE F + R + +R + V+D+ R L ++ + +
Sbjct: 53 LNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANS 112
Query: 251 PSTVIFLIGNKSDL--DGQRDVTYEEAK 328
P +F + +K DL + RD+ +EE K
Sbjct: 113 PQARVFCLIHKMDLVQEDLRDLVFEERK 140
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 27.5 bits (58), Expect = 0.76
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 350 VHFHQQTALPLHMLHPFARLSQIYCQLR 267
+HF + ALP+ HPF L+++ +R
Sbjct: 463 IHFSKDRALPVSGSHPFLLLNEVQVPIR 490
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 25.8 bits (54), Expect = 2.3
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 141 RVTALNLSCPAVSQICNLIF*PATSMIRVPNSTPIV*GQSAINFLVP 1
R++ L+ S ++ + + I P++ + P+STPI SAIN + P
Sbjct: 252 RISRLHTSHASIDGLTDFIQSPSSGYLD-PSSTPITPLDSAINQITP 297
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 3.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 375 LALASTNISPFSSANCFASSYVTSLCPSKSD 283
L L S + P SS FAS+ V+ LC ++D
Sbjct: 385 LLLFSDALGPLSSILTFASNKVSRLCEYQAD 415
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 381 PVLALASTNISPFSSANCFASSYVTSLCPS 292
PV+A S +PF S F +SY T++ P+
Sbjct: 380 PVIAKTSALPNPFISFPSFQTSYETTVTPT 409
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 24.2 bits (50), Expect = 7.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 194 RSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 292
R + LSS LTD NL PS V + NK +L
Sbjct: 303 RMNDDSLSSNLTDLNNLVLPSNV---VNNKKEL 332
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 24.2 bits (50), Expect = 7.1
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 194 RSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFAD 340
R+ HL+ + NLT P +I L SD D D T E KQ D
Sbjct: 107 RNAAEHLNMFFGHMNNLTYPHELIDLAFLISDTD---DNTLEVLKQHLD 152
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 24.2 bits (50), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 41 GVEFG-TRIIEVAGQKIKLQIWDT 109
G EF + +EVA QK+ +WDT
Sbjct: 460 GFEFEVSEAVEVAFQKLSHNVWDT 483
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 24.2 bits (50), Expect = 7.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 152 RGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPS 256
RG A+ YD+ ST+ H S+ T+ P+
Sbjct: 170 RGLEYAVYNYDLPSESTFCHPSNGYTEVSTFNKPA 204
>SPAP27G11.12 |||human down-regulated in multiple cancers-1 homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 797
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 344 FHQQTALPLHMLHPF 300
F QQTALP+ M PF
Sbjct: 419 FQQQTALPISMPVPF 433
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 23.8 bits (49), Expect = 9.4
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 86 IKLQIWDTAGQE-RFRAVTRSYYRGAAGAL--MVYDITRRSTYNHLSSWLTDTRNLTNPS 256
I L W G + F Y R G + + YD T +N L+ W+ + L++PS
Sbjct: 171 ISLAEWSPTGHQLSFVYNNDLYVRKNDGNVQRLTYDGTV-DVFNGLTDWIYEEEVLSSPS 229
Query: 257 TV 262
T+
Sbjct: 230 TI 231
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 363 STNISPFSSANCFASSYVTSLCPSKSDLLPIKN 265
ST +SP++ + ++ + PS DLLP N
Sbjct: 1384 STTLSPWAMKSLAQAAISPNPMPSAHDLLPTSN 1416
>SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 518
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 134 VTRSYYRGAAGALMVYDITR 193
VT++YY + AL +YD+ R
Sbjct: 46 VTKAYYPSSQQALKLYDLLR 65
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 23.8 bits (49), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 47 EFGTRIIEVAGQKIKLQIW 103
+FG RI++V +KI ++W
Sbjct: 551 DFGIRIVDVQTRKIVRELW 569
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 182 DITRRSTYNHLSSWLTDTRNLTNPSTVI 265
D T R + HL SW + T+PS ++
Sbjct: 1427 DTTFRPLFLHLHSWALEDLYETDPSGIV 1454
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,525,896
Number of Sequences: 5004
Number of extensions: 27573
Number of successful extensions: 100
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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