Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I09
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           117   2e-28
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    42   6e-06
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    23   2.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  117 bits (281), Expect = 2e-28
 Identities = 53/115 (46%), Positives = 76/115 (66%)
 Frame = +2

Query: 35  TIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 214
           TIG  F T+ + +    +K +IWDTAGQER+ ++   YYRGA  A++VYDI    ++   
Sbjct: 56  TIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARA 115

Query: 215 SSWLTDTRNLTNPSTVIFLIGNKSDLDGQRDVTYEEAKQFADENGLMFVEASAKT 379
            +W+ + +   +P+ VI L GNK+DL   R V YEEAKQ+AD+N L+F+E SAKT
Sbjct: 116 KTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFMETSAKT 170


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 71  VAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDTRNLT 247
           V G ++ L +WDTAGQE +  +    Y      L+ Y +   S++ +++S W  + ++  
Sbjct: 49  VDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHC 108

Query: 248 NPSTVIFLIGNKSDLDGQRD 307
            P   I L+G K DL   R+
Sbjct: 109 -PDAPIILVGTKIDLREDRE 127


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 212 LSSWLTDTRNLTNP 253
           L+SWLT  R  TNP
Sbjct: 196 LASWLTAVRERTNP 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,257
Number of Sequences: 2352
Number of extensions: 6847
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)