Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I09
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   6.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   8.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   8.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   8.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   8.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   8.6  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 235 PQPH*SKHCDILNWQ 279
           P  H    CD+L+WQ
Sbjct: 56  PLRHRRVTCDVLSWQ 70


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 142 IVLQGCSWCTHG 177
           I+  G  WC HG
Sbjct: 29  IIYPGTLWCGHG 40


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 217 QLAYGHPQPH*SKH 258
           Q+ YGH Q H   H
Sbjct: 801 QMIYGHQQSHHGLH 814


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 142 IVLQGCSWCTHG 177
           I+  G  WC HG
Sbjct: 34  IIYPGTLWCGHG 45


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 141 DRITGVQLVHSWFMI*QEDRHI 206
           D  T V  +HSW  +   D H+
Sbjct: 83  DDWTSVMELHSWMTLMWTDSHL 104


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 142 IVLQGCSWCTHG 177
           I+  G  WC HG
Sbjct: 34  IIYPGTLWCGHG 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,597
Number of Sequences: 438
Number of extensions: 1852
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)