Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I06
(509 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 257 1e-67
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 252 3e-66
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 227 1e-58
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 169 3e-41
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 168 7e-41
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 163 3e-39
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 145 4e-34
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 118 1e-25
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 115 7e-25
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 107 1e-22
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 105 4e-22
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 105 4e-22
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 105 6e-22
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 103 2e-21
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 102 5e-21
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 100 2e-20
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 95 8e-19
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 95 1e-18
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 93 3e-18
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 79 8e-14
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 78 1e-13
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 77 3e-13
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 75 9e-13
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 2e-12
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 71 2e-11
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 71 2e-11
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 5e-11
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 69 8e-11
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 67 2e-10
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 63 3e-09
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 63 4e-09
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 62 7e-09
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 3e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 3e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 5e-08
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 58 1e-07
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 57 2e-07
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 55 8e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 54 1e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 2e-06
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 52 8e-06
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 52 1e-05
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 51 2e-05
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 2e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 49 5e-05
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 49 7e-05
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 49 7e-05
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 49 7e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 1e-04
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 47 3e-04
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 45 0.001
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 44 0.002
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.025
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 2.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 3.8
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 5.0
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 6.6
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 6.6
UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q00873 Cluster: Cytochrome c1 heme lyase; n=5; Saccharo... 32 8.7
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 257 bits (629), Expect = 1e-67
Identities = 120/152 (78%), Positives = 134/152 (88%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 234 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 413
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 414 VVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V +PA NTGLGPEKTSFFQAL I TKI +GTI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTI 152
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 252 bits (617), Expect = 3e-66
Identities = 118/152 (77%), Positives = 133/152 (87%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 234 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 413
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 414 VVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V +PA NTGLGPEKTSFFQAL I TKI +GTI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTI 152
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 227 bits (554), Expect = 1e-58
Identities = 102/152 (67%), Positives = 126/152 (82%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 234 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 413
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 414 VVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V +PA NTGLGPEKTSFFQALSI TKI +GTI
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTI 152
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 169 bits (411), Expect = 3e-41
Identities = 82/152 (53%), Positives = 107/152 (70%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 234 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 413
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 414 VVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V++PA +TGL P +T+F QAL+I +KI KG I
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQI 159
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 168 bits (408), Expect = 7e-41
Identities = 82/154 (53%), Positives = 110/154 (71%), Gaps = 2/154 (1%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 234 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 407
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 408 LSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
+ VV+ NTGL P +TSFFQ L+IPTKI KGT+
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTV 154
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 163 bits (395), Expect = 3e-39
Identities = 80/149 (53%), Positives = 107/149 (71%), Gaps = 2/149 (1%)
Frame = +3
Query: 69 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 248
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 249 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 422
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 423 PAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
NTGL P +TSFFQ L+IPTKI KGT+
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTV 155
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 145 bits (352), Expect = 4e-34
Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 234 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 410
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 411 SVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V IP TG+ P TSF ++L I TKI KG I
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQI 153
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 118 bits (283), Expect = 1e-25
Identities = 60/143 (41%), Positives = 86/143 (60%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 261 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 440
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 441 LGPEKTSFFQALSIPTKIXKGTI 509
+ P +TSF Q L I TKI +G I
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQI 151
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 115 bits (276), Expect = 7e-25
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 18/170 (10%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 230
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 231 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 359
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 360 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQI 170
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 107 bits (258), Expect = 1e-22
Identities = 60/170 (35%), Positives = 101/170 (59%), Gaps = 18/170 (10%)
Frame = +3
Query: 54 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 230
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 231 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 359
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 360 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI K I
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQI 170
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 105 bits (253), Expect = 4e-22
Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 17/160 (10%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 261 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 389
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 390 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
G IAP V + TG+ P +TSFFQAL I TKI KG I
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQI 162
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 105 bits (253), Expect = 4e-22
Identities = 62/147 (42%), Positives = 86/147 (58%)
Frame = +3
Query: 69 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 248
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 249 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 428
+ L+ + L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 429 HNTGLGPEKTSFFQALSIPTKIXKGTI 509
T GP++ F+ AL I TKI KG I
Sbjct: 127 MLTQSGPDQHGFYAALGIDTKINKGKI 153
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 105 bits (252), Expect = 6e-22
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 261 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 413
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 414 VVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
V++PA NTG+ P+ TSFFQAL+I TKI KGT+
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTV 159
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 103 bits (248), Expect = 2e-21
Identities = 63/139 (45%), Positives = 73/139 (52%)
Frame = -2
Query: 508 IVPLXILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 329
+VPL ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 328 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 149
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 148 APTMKHFGYSSNSWMILTK 92
PT YSS + L K
Sbjct: 121 TPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 102 bits (244), Expect = 5e-21
Identities = 61/164 (37%), Positives = 91/164 (55%), Gaps = 16/164 (9%)
Frame = +3
Query: 66 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 245
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 246 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 377
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 378 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
APAR G +A V+IP TG+ P + +FF ALSI TKI KG I
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQI 170
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 100 bits (240), Expect = 2e-20
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +3
Query: 45 QSKMGREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLM 218
Q G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M
Sbjct: 8 QPPSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRM 67
Query: 219 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 398
+NT+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG
Sbjct: 68 SRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGD 127
Query: 399 IAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKIXKGTI 509
IAP +V+P T P S Q +P +I G +
Sbjct: 128 IAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKV 165
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 95.1 bits (226), Expect = 8e-19
Identities = 56/157 (35%), Positives = 90/157 (57%)
Frame = +3
Query: 39 FTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 218
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 219 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 398
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 399 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIXKGTI 509
+A V + + TG+ P+KTS+FQAL I TKI KG +
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKV 174
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 94.7 bits (225), Expect = 1e-18
Identities = 47/143 (32%), Positives = 81/143 (56%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 261 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 440
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 441 LGPEKTSFFQALSIPTKIXKGTI 509
+ P+ FQ+L+IPTKI KG I
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQI 151
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 93.1 bits (221), Expect = 3e-18
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 257
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 438 GLGPEKTSFFQALSIPTKIXKGTI 509
+ P AL+I KI KGTI
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTI 154
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 78.6 bits (185), Expect = 8e-14
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 63 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 242
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 243 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 422
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 423 PAHNTGLGPEK-TSFFQALSIPTKIXKGTI 509
P +TG+ P Q + +I +G+I
Sbjct: 127 PEGDTGIDPGPFVGELQTIGANARIQEGSI 156
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 78.2 bits (184), Expect = 1e-13
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Frame = +3
Query: 72 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 248
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 249 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 422
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 423 PAHNTGLGPEK-TSFFQALSIPTKIXKGTI 509
PA T L P QAL IP +I KG +
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKV 154
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 76.6 bits (180), Expect = 3e-13
Identities = 41/137 (29%), Positives = 72/137 (52%)
Frame = +3
Query: 99 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 278
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 279 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 458
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 459 SFFQALSIPTKIXKGTI 509
FFQAL IPT+I K +I
Sbjct: 131 PFFQALGIPTRISKSSI 147
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 74.9 bits (176), Expect = 9e-13
Identities = 46/132 (34%), Positives = 63/132 (47%)
Frame = -1
Query: 509 NSTLXNLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKIS 330
N T NL + +SLEERSL V N D W N + + + V I +
Sbjct: 175 NGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGI 234
Query: 329 TGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ*NTDLLHLLRAYIV 150
GED+ N++LD R+Q F W D HGV H+ N+ +Q +D +HLL +IV
Sbjct: 235 VGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDNSSASQVLSDFVHLLGRHIV 294
Query: 149 RTHYETFWVFVQ 114
T+ E VF Q
Sbjct: 295 NTNNEDRLVFFQ 306
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 2e-12
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +3
Query: 237 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 374
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 24.2 bits (50), Expect(2) = 2e-12
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 471 ALSIPTKIXKGTI 509
ALSIP KI KGTI
Sbjct: 738 ALSIPIKISKGTI 750
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 70.9 bits (166), Expect = 2e-11
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 258 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 431
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 432 NTGLGPEKT-SFFQALSIPTKIXKGTI 509
NTG+ P S F L IPT+I G I
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQIRDGKI 164
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 70.5 bits (165), Expect = 2e-11
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 72 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 251
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 252 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 431
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 432 NTGLGPEK-TSFFQALSIPTKIXKGTI 509
+T P Q + IP KI KG+I
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSI 149
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 69.3 bits (162), Expect = 5e-11
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +3
Query: 108 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 287
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 288 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 464
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 465 FQALSIPTKIXKGTI 509
F L IPT++ +G I
Sbjct: 147 FGKLKIPTRVQEGKI 161
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 68.5 bits (160), Expect = 8e-11
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 261 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 440
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 441 L--GPEKTSFFQALSIPTKIXKGTI 509
+ GP T F +A IPTKI +GTI
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTI 153
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 66.9 bits (156), Expect = 2e-10
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Frame = +3
Query: 72 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 251
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 252 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 425
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 426 AHNTGLGPEK-TSFFQALSIPTKIXKGTI 509
+ +TG+ P S +A+ IP I KG I
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKI 159
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 63.3 bits (147), Expect = 3e-09
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 438 GLGP-EKTSFFQALSIPTKIXKGTI 509
L P Q L IP+ I G +
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKV 150
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 62.9 bits (146), Expect = 4e-09
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +3
Query: 138 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 317
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 318 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 491
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 492 IXKGTI 509
I +GTI
Sbjct: 134 IDQGTI 139
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 62.1 bits (144), Expect = 7e-09
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 438 GLGPEK-TSFFQALSIPTKIXKGTI 509
P Q + IP I G +
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKV 152
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +3
Query: 204 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 383
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 384 ARPGAIAPLSVVIPAHNTGL 443
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 159 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 332
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 333 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 443
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +3
Query: 267 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 443
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 59.3 bits (137), Expect = 5e-08
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Frame = +3
Query: 72 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 251
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 252 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 428
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 429 HNTGL--GPEKTSFFQALSIPTKIXKGTI 509
+TG+ GP S F L + TK+ G +
Sbjct: 130 GDTGMPAGP-ILSVFGKLKVQTKVQDGKV 157
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 58.0 bits (134), Expect = 1e-07
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 257
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 438 GLGP-EKTSFFQALSIPTKIXKGTI 509
G+ P S F L IPT++ +G+I
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSI 158
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 57.2 bits (132), Expect = 2e-07
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 261 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 434
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--Q 150
Query: 435 TGLGPEKTSF-----FQALSIPTKIXKGTI 509
L +K SF + L +PT + I
Sbjct: 151 GPLDRDKYSFALEPELRKLGLPTSLQNTVI 180
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 55.2 bits (127), Expect = 8e-07
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 251
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 252 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 431
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 432 N-TGLGPEKTSFFQALSIPTKIXKGTI 509
++L +PTK+ KG +
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEKGIV 168
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 54.4 bits (125), Expect = 1e-06
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 438 GLGPEK-TSFFQALSIPTKIXKGTI 509
GL P S F L IPT+I +I
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSI 156
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 260
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 261 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 428
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 52.0 bits (119), Expect = 8e-06
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 257
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 258 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 434
++ P L L ++KG +FT+ ++R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 435 TGLGPEKTS-FFQALSIPTKIXKGTI 509
P + L +P K+ +G +
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVV 161
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 51.6 bits (118), Expect = 1e-05
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 438 GLGP-EKTSFFQALSIPTKIXKGTI 509
P FQ + IP I G +
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKV 159
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 50.8 bits (116), Expect = 2e-05
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +3
Query: 60 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 236
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 237 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 416
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 417 VIPAHNTGLGPEK-TSFFQALSIPTKIXKGTI 509
V+PA +TGL P S F L I T + GTI
Sbjct: 131 VVPAGDTGLTPGPILSTFGKLKIKTMVKGGTI 162
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 50.4 bits (115), Expect = 2e-05
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 438 GLGPEK-TSFFQALSIPTKIXKGTI 509
P Q+ IP I G +
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKV 155
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 49.2 bits (112), Expect = 5e-05
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +3
Query: 51 KMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNT 230
K G E KA F + Q LD + +I N+ + +++IR +G S + MGK
Sbjct: 17 KKGHEGKAA----LFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTK 71
Query: 231 MMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAI 401
+M KA+ E A + KL + G VG +FT +V E+ VQ AR GA+
Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAV 130
Query: 402 APLSVVIPA 428
AP + VIPA
Sbjct: 131 APFTHVIPA 139
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 48.8 bits (111), Expect = 7e-05
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 3/159 (1%)
Frame = +3
Query: 42 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 221
TQ+K REDK +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-REDK----DKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 222 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 395
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 396 AIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKIXKGTI 509
A S+V+ P L +P K+ +G I
Sbjct: 130 QTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVI 168
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 48.8 bits (111), Expect = 7e-05
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Frame = +3
Query: 48 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 227
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 228 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 401
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 402 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKIXKGTI 509
A +VV+P + + L +PTK+ KG I
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVI 168
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 48.8 bits (111), Expect = 7e-05
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Frame = +3
Query: 78 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 257
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 258 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 437
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 438 GLGP-EKTSFFQALSIPTKIXKGTI 509
P Q+ IP I G +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKV 155
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 48.0 bits (109), Expect = 1e-04
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +3
Query: 99 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 278
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 279 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 455
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPL 134
Query: 456 TSFFQALSIPTKIXKGTI 509
+ Q +P I KG +
Sbjct: 135 MAELQMAGLPVAIEKGKV 152
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 46.8 bits (106), Expect = 3e-04
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Frame = +3
Query: 42 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 221
TQ+K ++D+ WKS ++ L E ++ +N+ + +++R + + +G
Sbjct: 13 TQTK--KKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVG 69
Query: 222 KNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 395
N ++R A+ +D E + L +KG+ G +FT DV V+ AR G
Sbjct: 70 SNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTG 129
Query: 396 AIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKIXKGTI 509
A+A +V + P H +G E T + +PTK+ +G I
Sbjct: 130 ALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVI 173
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 44.8 bits (101), Expect = 0.001
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Frame = +3
Query: 81 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 254
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 255 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 434
E L ++ H++G VG +FT +V + K AR G A +V +
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGP 148
Query: 435 TGLGPEKTS-FFQALSIPTKIXKGTI 509
P + L +PT + KG +
Sbjct: 149 LEQFPHSMEPQLRQLGLPTALKKGVV 174
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 466 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 293
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 292 GSSFSRAGF 266
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +3
Query: 138 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 317
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 318 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTK 491
+ T ++ + +E+KV P + G IAP +VIP N +GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTK 142
Query: 492 IXKGTI 509
+ G I
Sbjct: 143 VTSGKI 148
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 40.3 bits (90), Expect = 0.025
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +3
Query: 60 REDKATW--KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 233
R DK T K+N K+ EYP +I+G ++ + ++++R +G S + GK +
Sbjct: 14 RTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKV 72
Query: 234 MRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 407
+ A+ + E + + + G+VG +FT +V D + + AR G+ A
Sbjct: 73 LALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKAT 132
Query: 408 LSVVIP 425
++ +P
Sbjct: 133 ETIELP 138
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 486 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 358
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 108 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 257
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 5.0
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 304 EMLALS-SPVEILLMCVINCWRTKSKPR 384
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 6.6
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 225 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 404
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 405 PLSVVIPAHN 434
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 6.6
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1
Query: 452 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 273
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 272 WICFKMVLDGFPHHG 228
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
>UniRef50_A6C829 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 373
Score = 31.9 bits (69), Expect = 8.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 246 WLSSSWCFCP*AQCCDHAMKYGSVASVASLHCPHPL*NILGI 121
+ S C C QC M++G ++ V +LH P P+ I GI
Sbjct: 279 YYSMPHCLC---QCMPEMMRFGEMSDVVALHAPRPVLLINGI 317
>UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 792
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -1
Query: 452 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 273
L+ KA + N R S + T+ +F+ + F+TH + +N S ++F+E
Sbjct: 234 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFLTHRTN-GLKKANSNFSAKENEKFYEC 291
Query: 272 WICFKMVLDGFPHHG 228
W + ++ PHHG
Sbjct: 292 WERYMEAINACPHHG 306
>UniRef50_Q00873 Cluster: Cytochrome c1 heme lyase; n=5;
Saccharomycetales|Rep: Cytochrome c1 heme lyase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 224
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 500 LXNLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGE 321
L N GD K L R+ R++ ++ DR R + +D+V+ + T +N + +
Sbjct: 137 LTNFKGDSKKLTPRAWFRSRILHLAKPFDRHDWQIDRCGKTVDYVIDFYSTDLND-ANSQ 195
Query: 320 DKANISLDVR 291
+ I LDVR
Sbjct: 196 QQPLIYLDVR 205
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,366,474
Number of Sequences: 1657284
Number of extensions: 12018713
Number of successful extensions: 37332
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 36055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37294
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -