Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_I03
         (438 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    29   0.096
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   1.6  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   2.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   3.6  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   4.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.3  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   6.3  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 0.096
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 111 TTSRCWFQEACTPCYQGDPEIR*KTNG-YSRRKSR 212
           T S+C+FQ+ C  C   D +    T+  Y  RKSR
Sbjct: 29  TQSKCFFQKNCIECLDADKDCAWCTDELYDMRKSR 63


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 109 KRLHGVGFKKRAPRAIKEIR 168
           +RLH  GF  R PR +++++
Sbjct: 96  RRLHAAGFCARRPRKVRKLQ 115


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 109 KRLHGVGFKKRAPRAIKEI 165
           +RLH  GF  R PR ++++
Sbjct: 24  RRLHAAGFCARRPRKVRKL 42


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 342 CARCLHQGFADREC*RQP 395
           C RCL +G   REC R P
Sbjct: 364 CYRCLERGHIAREC-RSP 380


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 342 CARCLHQGFADREC 383
           C RCL +G   R+C
Sbjct: 406 CYRCLERGHVSRDC 419


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 339 ICARCLHQGFADREC 383
           +C  CL +G + REC
Sbjct: 376 LCFNCLRKGHSAREC 390


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 342 CARCLHQGFADREC 383
           C RCL +G   REC
Sbjct: 236 CFRCLERGHMVREC 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,260
Number of Sequences: 2352
Number of extensions: 8899
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)