Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_I02
(599 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 85 5e-17
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 67 9e-12
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 60 2e-09
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 57 9e-09
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 44 7e-05
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 41 9e-04
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 40 0.002
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 39 0.003
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 38 0.006
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 37 0.011
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 35 0.044
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 34 0.10
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 33 0.23
SB_55521| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-24) 32 0.31
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 32 0.31
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 32 0.31
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 32 0.41
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 30 1.2
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.8
SB_20715| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3) 28 6.6
SB_38758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_5262| Best HMM Match : IncA (HMM E-Value=2.1) 28 6.6
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 27 8.8
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 84.6 bits (200), Expect = 5e-17
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
KCP+C K+VY AEER+A G KWHK C C C K LDSTN ++ +GE++CK C+ + F
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNF 66
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 67.3 bits (157), Expect = 9e-12
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 108 ADN-PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHA 284
ADN PKCP+CG +VY AEE K+HK CF C C+K LDSTN + H+G+ +
Sbjct: 38 ADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGKCHTTIVTQ 97
Query: 285 RK 290
R+
Sbjct: 98 RR 99
Score = 58.8 bits (136), Expect = 3e-09
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHE 254
CP+C K YAAE+ + G WHK CF C C K LDST + H+
Sbjct: 218 CPRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDSTTVAVHK 261
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCG--MCQKLLDSTNCSEHEG 257
+C +C K Y AE G +WHK CF C C+K L+STNC E G
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNG 343
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 93 MPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSE 248
M K PKCPKC K+VY+AE + G+ +HK CF C C K LDST ++
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHE 254
KCP+C K VY AE+ A G WHK C C C K LDSTN + +
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +3
Query: 105 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHA 284
P+ C CG+ E + A G ++H CF+C +C++ L ST+ EL+CK +
Sbjct: 5 PSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCKKDYL 63
Query: 285 RKF 293
KF
Sbjct: 64 SKF 66
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVA-GGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
+C CG+ + + R+ G WH+ CF+C C + + ++ + FC C+ KF
Sbjct: 401 ECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 459
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHAR 287
+C CG+ + + G WHK CF C C + L S S +G +C C+ +
Sbjct: 462 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 516
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVC 278
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 521 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 99 FKPADNPKCPKCGKSVYAAEERVAGG--LKWHKMCFKCGMCQKLLDST-NCSEHEGELFC 269
FK + +C C + + ++ WH CF C +C++ L S + + ++ C
Sbjct: 331 FKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILC 390
Query: 270 KVCHARKF 293
C+ +
Sbjct: 391 NNCYVANY 398
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHAR 287
+C CG+ + + G WHK CF C C + L S S +G +C C+ +
Sbjct: 50 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 104
Score = 35.1 bits (77), Expect = 0.044
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 183 WHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
WH+ CF+C C + + ++ + FC C+ KF
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 47
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVC 278
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 109 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMC-QKLLDSTNCSEHEGELFCKVCHARKF 293
+C C + G WH C KC +C +L C +G+++CK +AR+F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQF 159
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 120 KCPKCGKSVYAAE-ERVAGGLKWHKMCFKCGMCQKLLDS-TNCSEHEGELFCKV 275
KC +CG+S++A + R A +H CF C C++ L + + +G + CK+
Sbjct: 162 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKL 215
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 ASTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDS-TNCSEHEGE 260
A M P+ C CG+ VY E VA +H+ CF+C C L + T E E
Sbjct: 598 APMMQCMPSLGTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESE 657
Query: 261 LFC 269
FC
Sbjct: 658 SFC 660
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDS-TNCSEHEGELFCKVCHARKF 293
C CG + +A +WH C KC C+ LD+ C +G + C+ + R+F
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRF 305
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERV-AGGLKWHKMCFKCGMCQKLLDSTNCSEHEG-ELFCK 272
KC C +++ + E + A +H CF C C+++L + G ++CK
Sbjct: 309 KCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 KWHKMCFKCGMCQKLLDSTNCSEHE 254
K+HK CF C C+K LDSTN + H+
Sbjct: 5 KFHKKCFSCKDCRKKLDSTNAASHD 29
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
C KC + + + + AG +H CF C C K L + ++ EG C+ C+ ++
Sbjct: 237 CVKCNQVIKTSSVQHAGST-YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERY 292
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKW-HKMCFKCGMCQKLLDSTNCSEHEGELFCKVC 278
+C C + + VA K+ H+ CF C C K L +GE C C
Sbjct: 295 RCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 363 LSDDRQCPWKGSQRH-RRSHSLLVQIYVRGTLCRTVHLRVLSSWSNPITSGTYR 205
L+ R C + GSQR RRS S + + RG C HLR +SW++P + T R
Sbjct: 137 LAATRTCLFPGSQRSSRRSLSFIAVVRARG--CHRRHLRARASWTSPSSHLTLR 188
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 111 DNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTN-CSEHEGELFCKVCH 281
++ +C CGKSV E +HK CF C +C L+ N C + + F V H
Sbjct: 241 ESNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHDKFYCVQH 298
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 183 WHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
+H CF C C+K L +EHEG C C+ ++
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRY 118
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCK 272
C CG+++ ++ +A +WH CF C C LL S +G+ +C+
Sbjct: 89 CAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLL-SLEYMGMDGKPYCE 137
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 183 WHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
WH C +C C+ L + C EG+LFCK R++
Sbjct: 25 WHAQCVQCSDCKCPL-TERCFSREGKLFCKTDFYRRY 60
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 123 CPKCGKSVYAAEERV----AGGLK-WHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHAR 287
C +C K V E V AG K WH CF C +C LL +G ++C +A
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 288 KF 293
+F
Sbjct: 369 QF 370
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 117 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHARKF 293
P+C C + +++ A WH+ F C C + L G+ C C+ + +
Sbjct: 372 PRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYY 430
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +3
Query: 15 SALNC*RVRELDSRSDSTNRIS*ASTMPFKPADNPKCPKCGKSVYAAEERV-AGGLKWHK 191
S L C R SRS + ++ KC C K++ A E + A G +H
Sbjct: 69 SCLQCCICRSQLSRSCFSKDRKLYCRTDYEKVFGTKCSGCKKTIPANELVMRALGNVYHL 128
Query: 192 MCFKCGMCQKLLD-STNCSEHEGELFCKVCHAR 287
CF C MC +L+ + + +L+CK A+
Sbjct: 129 HCFVCTMCGHILEKGQEFALKDNKLYCKADFAK 161
>SB_55521| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-24)
Length = 567
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 384 LALNSHRLSDDRQCPWKGSQRHRRSH 307
L L+ H ++ CPW+G RHR++H
Sbjct: 84 LELHVHCVNQPHGCPWEGELRHRQNH 109
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERV-AGGLKWHKMCFKCGMCQKLLD-STNCSEHEGELFCKVCHAR 287
KC C K++ A E + A G +H CF C MC +L+ + + +L+CK A+
Sbjct: 6 KCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFAK 63
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCK 272
C C K + + A G WH F C C+ L + N E +G+ +C+
Sbjct: 282 CAACNKPIIG-QVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/52 (26%), Positives = 20/52 (38%)
Frame = +3
Query: 117 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCK 272
P+C C + + A WH F C C T E +G+ FC+
Sbjct: 339 PRCAYCNGPILDSCV-TALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCR 389
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQK 221
C CGK + A ER+A ++ HK F C +C+K
Sbjct: 106 CGNCGKDM-ATPERLAKHMETHKKKFGCDICEK 137
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 123 CPKCGKSVYAAEERVA-GGLKWHKM--CFKCGMCQKLLDSTNCSEHEGELFC 269
C CG+ + ++A G WH CF C C K L GE++C
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 123 CPKCGKSVYAAE-----ERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCHA 284
C +CG+ V A R WH CF C C++LL + +++C HA
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHA 136
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 117 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCKVCH 281
P+C C + ++A + A WH F C C L + + +C CH
Sbjct: 141 PRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC--CH 193
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 105 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQKLLDSTNCSEHE--GELFCKVC 278
P + C C + + A G WH+ C KC C L S + + CK
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRD 70
Query: 279 HARKF 293
+ R F
Sbjct: 71 YLRLF 75
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 123 CPKCGKSVYAAEERV--AGGLKWHKMCFKCGMCQKLLDSTNCSEHEGELFCK 272
C CG+ V E+RV A G WH F C C+K E +G +C+
Sbjct: 81 CFCCGRPV---EDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCE 129
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 183 WHKMCFKCGMCQKLLDSTNCSEHEGELF 266
WH CF+C +C L T ++ G +
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTY 60
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGMC 215
KCP C K E+R + HK ++CG C
Sbjct: 188 KCPHCKKVFSDKEKRKDHYISAHKKEYRCGKC 219
>SB_20715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 HEGHICPELLTRPGARLS*RLDE-QDKLSEHNAFQTSRQPEVPEMREISLRGRGASCRW 175
H+ HI PEL+TR +L ++DE + K + + F +QPE I +W
Sbjct: 489 HKRHIAPELVTR---KLELQIDETEHKKNTNELFCVCQQPECEGDEMIGCDNPSCKYKW 544
>SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 20 PELLTRPGARLS*RLDEQDK----LSEHNAFQTSRQPEVPEMREISLRGRGASCRWAQMA 187
P++ RPGAR++ + E+D+ + + + + +Q E E + + G+ W + A
Sbjct: 174 PDIALRPGARVTLKRREEDETDFGMGDLSIGEKPKQAEPIEFNKTEVGAEGSGYLWFEEA 233
Query: 188 QNVLQMRYVPEVIGFDQ 238
++ + V +V G ++
Sbjct: 234 ESDDESDKVEDVWGAER 250
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 183 WHKMCFKCGMCQKLLDSTNCSEHEGELFC 269
WHK CFKC C L+ ++ +C
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 36 VRELDSRSDSTNRIS*ASTMPFKPADNP-KCPKCGKSVYAAEERVAGGLKWHKMCFKCGM 212
V E+ S+S +T+R S M D P +C CGKS E K +KC +
Sbjct: 621 VCEVCSKSFTTSR-SMVRHMLTHSEDRPYQCDVCGKSYKCYEALTKHTTTHSKKPYKCNV 679
Query: 213 CQK 221
C K
Sbjct: 680 CDK 682
>SB_13460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 454 RHTVL*ITLVRIIYSLSLNLFCLSVYYSLIYK 549
RHTV+ ++ V ++ + L+++ S Y+ ++Y+
Sbjct: 27 RHTVITVSTVNLLAFVKLSVYVTSPYFPVVYR 58
>SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3)
Length = 615
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 338 HGHWRSSESRCELSASCHPAEVADR 412
H WRS +RC +A H AE +R
Sbjct: 482 HASWRSGSARCLTAAGHHTAESINR 506
>SB_38758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 82 KRAQCLSNQQTTRSARNAGNQFTRPRSELPVGSNGTKCASNAVCARSY 225
KR + N Q+ R+ + G + L V N + AS A C R+Y
Sbjct: 224 KRREFTPNPQSVRNLKERGFEEKEIMVALKVSGNNPEAASFAFCFRNY 271
>SB_5262| Best HMM Match : IncA (HMM E-Value=2.1)
Length = 597
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 338 HGHWRSSESRCELSASCHPAEVADR 412
H WRS +RC +A H AE +R
Sbjct: 202 HASWRSGSARCLTAAGHHTAESINR 226
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 402 TSAGWQLALNSHRLSD--DRQCPWKGSQRHRRSHSLLVQIYVRGTLCRTVHLRV 247
+++ WQL L D D+Q + R S ++L+Q VRG L R V+LR+
Sbjct: 653 SNSDWQLGKTKIFLKDAQDQQLE-EHRDRLLTSRAILIQKVVRGFLTRKVYLRM 705
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +3
Query: 120 KCPKCGKSVYAAEERVAGGLKWH-KMCFKCGMCQKLL----DSTNCSE-HEG--ELFCKV 275
+CP CGKS+ + + + + FKC +C K D T S+ HE + FCK
Sbjct: 374 ECPTCGKSLGSKTDLNRHAVVHSGEKPFKCTICSKAFSQKGDLTRHSQNHENGKKFFCKF 433
Query: 276 C 278
C
Sbjct: 434 C 434
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 332 PFHGHWRSSESRCELSASCHPAEVADRRHASRPT 433
P HG W + S SC ++ RH S P+
Sbjct: 617 PVHGGWSEWTTWSPCSVSCSNGTISRTRHCSNPS 650
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 39 RELDSRSDSTNRIS*ASTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGMCQ 218
++ + + +ST S AS+ P + KCP CG+ + +AG L M G
Sbjct: 56 QQQEQKQNSTTSSSSASSSPLQRL---KCPTCGQEFLVPPKGIAGFLDNQFMLESLGRQT 112
Query: 219 KLLDSTN 239
+ +ST+
Sbjct: 113 RKKESTD 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,781,278
Number of Sequences: 59808
Number of extensions: 340710
Number of successful extensions: 1168
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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