Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H24
         (552 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   254   8e-68
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   254   8e-68
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   254   8e-68
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   241   3e-64
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   183   2e-46
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...   106   2e-23
M74078-1|AAA28498.1|  878|Drosophila melanogaster ecdysone recep...    29   5.5  
BT015234-1|AAT94463.1|  878|Drosophila melanogaster RE06878p pro...    29   5.5  
BT012469-1|AAS93740.1|  878|Drosophila melanogaster RE33854p pro...    29   5.5  
AY075461-1|AAL68274.1|  872|Drosophila melanogaster RE16656p pro...    29   5.5  
AY058575-1|AAL13804.1|  492|Drosophila melanogaster LD26915p pro...    29   5.5  
AE013599-153|AAF57280.2|  878|Drosophila melanogaster CG1765-PB,...    29   5.5  
AE013599-152|AAM68347.1|  669|Drosophila melanogaster CG1765-PC,...    29   5.5  
AE013599-151|AAM68346.1|  849|Drosophila melanogaster CG1765-PE,...    29   5.5  
AE013599-150|AAG22334.2|  849|Drosophila melanogaster CG1765-PD,...    29   5.5  
AE013599-149|AAF57278.3|  849|Drosophila melanogaster CG1765-PA,...    29   5.5  
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    28   9.7  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    28   9.7  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  254 bits (621), Expect = 8e-68
 Identities = 119/150 (79%), Positives = 130/150 (86%)
 Frame = +2

Query: 74  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 253
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 254 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 433
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 434 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKK 523
           FCIGFT KD  SQRKTCYAQ +QVR IR +
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRAR 170


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  254 bits (621), Expect = 8e-68
 Identities = 119/150 (79%), Positives = 130/150 (86%)
 Frame = +2

Query: 74  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 253
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 254 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 433
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 434 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKK 523
           FCIGFT KD  SQRKTCYAQ +QVR IR +
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRAR 170


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  254 bits (621), Expect = 8e-68
 Identities = 119/150 (79%), Positives = 130/150 (86%)
 Frame = +2

Query: 74  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 253
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 254 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 433
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 434 FCIGFTNKDTLSQRKTCYAQHTQVRAIRKK 523
           FCIGFT KD  SQRKTCYAQ +QVR IR +
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRAR 170


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  241 bits (591), Expect = 3e-64
 Identities = 115/149 (77%), Positives = 125/149 (83%), Gaps = 1/149 (0%)
 Frame = +2

Query: 74  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSD 250
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 251 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 430
            E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LR
Sbjct: 81  PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140

Query: 431 VFCIGFTNKDTLSQRKTCYAQHTQVRAIR 517
           VFCIGFT KD  SQRKTCYA  +QVR IR
Sbjct: 141 VFCIGFTAKDQQSQRKTCYAHESQVRKIR 169


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  183 bits (445), Expect = 2e-46
 Identities = 87/107 (81%), Positives = 92/107 (85%)
 Frame = +2

Query: 203 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
           GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73

Query: 383 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKK 523
           IEA ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +
Sbjct: 74  IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRAR 120


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score =  106 bits (254), Expect = 2e-23
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = +2

Query: 329 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVR 508
           MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60

Query: 509 AIRKK 523
            IR +
Sbjct: 61  KIRAR 65


>M74078-1|AAA28498.1|  878|Drosophila melanogaster ecdysone receptor
           protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 429 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 464


>BT015234-1|AAT94463.1|  878|Drosophila melanogaster RE06878p
           protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 429 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 464


>BT012469-1|AAS93740.1|  878|Drosophila melanogaster RE33854p
           protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 429 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 464


>AY075461-1|AAL68274.1|  872|Drosophila melanogaster RE16656p
           protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 400 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 435


>AY058575-1|AAL13804.1|  492|Drosophila melanogaster LD26915p
           protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 43  WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 78


>AE013599-153|AAF57280.2|  878|Drosophila melanogaster CG1765-PB,
           isoform B protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 429 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 464


>AE013599-152|AAM68347.1|  669|Drosophila melanogaster CG1765-PC,
           isoform C protein.
          Length = 669

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 220 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 255


>AE013599-151|AAM68346.1|  849|Drosophila melanogaster CG1765-PE,
           isoform E protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 400 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 435


>AE013599-150|AAG22334.2|  849|Drosophila melanogaster CG1765-PD,
           isoform D protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 400 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 435


>AE013599-149|AAF57278.3|  849|Drosophila melanogaster CG1765-PA,
           isoform A protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 445 FHQQGYAQPTQDMLRSAYPSPRNQEKMCEIITRDVT 552
           ++Q GY QP+++ LR     P   E   ++  R +T
Sbjct: 400 WYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 435


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
            transmembrane protein protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 204  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 106
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
            protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 204  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 106
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,386,626
Number of Sequences: 53049
Number of extensions: 565641
Number of successful extensions: 1432
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)