Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H24
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 207 4e-54
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 30 0.96
U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016415-8|AAW88415.1| 297|Caenorhabditis elegans Serpentine re... 29 2.9
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 27 6.8
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 27 9.0
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 27 9.0
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 27 9.0
AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine r... 27 9.0
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 27 9.0
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 27 9.0
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 27 9.0
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 27 9.0
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 27 9.0
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 27 9.0
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 207 bits (506), Expect = 4e-54
Identities = 99/151 (65%), Positives = 118/151 (78%)
Frame = +2
Query: 77 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 256
VDPF+RK+WYD+KAP+MF RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL +++E
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76
Query: 257 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 436
FRKF+LIAEDVQG+NVL NFH M +T DKL +VKKW TLIEAN VKTTDGY LRVF
Sbjct: 77 ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVF 136
Query: 437 CIGFTNKDTLSQRKTCYAQHTQVRAIRKKCV 529
I FT K +KT Y + +++R IR + +
Sbjct: 137 VIAFTKKSVNQVKKTSYTKTSKIRKIRSEMI 167
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 219 TSKTRPFRPSDAIFVPWVRLTRVVPTCLLVNMDGA 115
TSK +P R D I V R T CL V GA
Sbjct: 2175 TSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209
>U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical
protein T14B4.8 protein.
Length = 235
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 186 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 82
+ F+P++R R VPT +++ +G + Y +L G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153
>AF016415-8|AAW88415.1| 297|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 32 protein.
Length = 297
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 411 VVLTSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRPWTSSAISL 274
V + ++ ++ V H F+ H L V +PW T R + AISL
Sbjct: 60 VYIIFVILTMEVPHLFSNHRGLIVTLGLPWSNFATCRSAIALAISL 105
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 117 RRPCSPRDKWAPPLSIAPREQKL 185
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 117 RRPCSPRDKWAPPLSIAPREQKL 185
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 117 RRPCSPRDKWAPPLSIAPREQKL 185
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 117 RRPCSPRDKWAPPLSIAPREQKL 185
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 337 EVHAVEIAENITSLDILSDKSELAE 263
E+H +E AE++ SL +L KSE+ +
Sbjct: 63 EMHIIEPAEHMKSLKVLMQKSEIEQ 87
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 65 RDMQHLVLRTANWKPLENNPGWSRNG 90
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine
receptor, class w protein91 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -1
Query: 483 HVLRWLSVS----LLVKPMQKTRRTYPSVVLTSMLASISVCHFFTIHLSLS 343
HV WLS+ + + TR+ S + S++ S+++C F ++ +S+S
Sbjct: 36 HVEFWLSIFGGILTIFHFLVLTRKAMKSTSIISLMISVAICDFLSMIVSIS 86
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 297 RDVMFSAISTAWTSPLINSDGW*RNG 374
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,905
Number of Sequences: 27780
Number of extensions: 276504
Number of successful extensions: 703
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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