Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H23
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 376 e-104
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 374 e-103
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 373 e-103
U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding fa... 36 0.080
U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein. 36 0.080
L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1 pr... 36 0.080
BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA bin... 36 0.080
BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA bin... 36 0.080
BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA bin... 36 0.080
AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA bin... 36 0.080
AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum G... 36 0.080
U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated prot... 31 3.0
CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein. 31 3.0
BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1, ... 31 3.0
AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens ... 31 3.0
AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein. 29 9.1
AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens ... 29 9.1
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 376 bits (925), Expect = e-104
Identities = 171/192 (89%), Positives = 185/192 (96%)
Frame = +3
Query: 9 PRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITIETDEDMVTEIKLKYFD 188
PRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKIT+ETDEDMVTEI+LKYFD
Sbjct: 308 PRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFD 367
Query: 189 TVPVASAMCVLKTGFLFVACEFGNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRP 368
TVPVA+AMCVLKTGFLFVA EFGNHYLYQIAHLGD+D+EPEFSSAMPLEEGDTFFF PRP
Sbjct: 368 TVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRP 427
Query: 369 LRNLVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSE 548
L+NLVLVDE+DSLSP+L C +ADLA EDTPQ+Y+ACGRGPRSS+R LRHGLEV+EMAVSE
Sbjct: 428 LKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSE 487
Query: 549 LPGSANAVWTVR 584
LPG+ NAVWTVR
Sbjct: 488 LPGNPNAVWTVR 499
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP
130 protein.
Length = 1217
Score = 374 bits (919), Expect = e-103
Identities = 170/192 (88%), Positives = 184/192 (95%)
Frame = +3
Query: 9 PRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITIETDEDMVTEIKLKYFD 188
PRRRNDLDDPERGMIFVCSATHKTKSMFFF AQTEQGDIFKIT+ETDEDMVTEI+LKYFD
Sbjct: 272 PRRRNDLDDPERGMIFVCSATHKTKSMFFFWAQTEQGDIFKITLETDEDMVTEIRLKYFD 331
Query: 189 TVPVASAMCVLKTGFLFVACEFGNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRP 368
TVPVA+AMCVLKTGFLFVA EFGNHYLYQIAHLGD+D+EPEFSSAMPLEEGDTFFF PRP
Sbjct: 332 TVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRP 391
Query: 369 LRNLVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSE 548
L+NLVLVDE+DSLSP+L C +ADLA EDTPQ+Y+ACGRGPRSS+R LRHGLEV+EMAVSE
Sbjct: 392 LKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSE 451
Query: 549 LPGSANAVWTVR 584
LPG+ NAVWTVR
Sbjct: 452 LPGNPNAVWTVR 463
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b,
subunit 3, 130kDa protein.
Length = 1217
Score = 373 bits (917), Expect = e-103
Identities = 170/192 (88%), Positives = 184/192 (95%)
Frame = +3
Query: 9 PRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITIETDEDMVTEIKLKYFD 188
PRRRNDLDDPERGMIFVCSATHKTKSMFF LAQTEQGDIFKIT+ETDEDMVTEI+LKYFD
Sbjct: 272 PRRRNDLDDPERGMIFVCSATHKTKSMFFSLAQTEQGDIFKITLETDEDMVTEIRLKYFD 331
Query: 189 TVPVASAMCVLKTGFLFVACEFGNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRP 368
TVPVA+AMCVLKTGFLFVA EFGNHYLYQIAHLGD+D+EPEFSSAMPLEEGDTFFF PRP
Sbjct: 332 TVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRP 391
Query: 369 LRNLVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSE 548
L+NLVLVDE+DSLSP+L C +ADLA EDTPQ+Y+ACGRGPRSS+R LRHGLEV+EMAVSE
Sbjct: 392 LKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSE 451
Query: 549 LPGSANAVWTVR 584
LPG+ NAVWTVR
Sbjct: 452 LPGNPNAVWTVR 463
>U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding
factor protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1
protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum
Group E Complementing protein protein.
Length = 1140
Score = 36.3 bits (80), Expect = 0.080
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 378 LVLVDEMDSLSPVLACHVADLAGEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
+V ++ +L P++ V DL + Q+ G S+R +R+G+ + E A +LPG
Sbjct: 347 VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 406
Query: 558 SANAVWTVR 584
+W +R
Sbjct: 407 -IKGLWPLR 414
>U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated protein
protein.
Length = 674
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 463 TCGVSSPAKSATWQANTGDRESISSTSTRFLNGRGAKK-NVSPSSKG 326
T +S +K +TW + G+ E+ ++ R +GA+K +VSP S G
Sbjct: 208 TSALSPGSKPSTWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSG 254
>CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein.
Length = 674
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 463 TCGVSSPAKSATWQANTGDRESISSTSTRFLNGRGAKK-NVSPSSKG 326
T +S +K +TW + G+ E+ ++ R +GA+K +VSP S G
Sbjct: 208 TSALSPGSKPSTWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSG 254
>BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 15A protein.
Length = 674
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 463 TCGVSSPAKSATWQANTGDRESISSTSTRFLNGRGAKK-NVSPSSKG 326
T +S +K +TW + G+ E+ ++ R +GA+K +VSP S G
Sbjct: 208 TSALSPGSKPSTWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSG 254
>AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ10499 fis, clone NT2RP2000346, weakly similar to
MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD116.
).
Length = 674
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 463 TCGVSSPAKSATWQANTGDRESISSTSTRFLNGRGAKK-NVSPSSKG 326
T +S +K +TW + G+ E+ ++ R +GA+K +VSP S G
Sbjct: 208 TSALSPGSKPSTWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSG 254
>AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein.
Length = 541
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 528 LLPDHVSMLLLM--IVALDHKLNILVECPHQLNLLHGKPIPVIENPFHRQAQDSSMA 364
LL D +S +L ++ALD +L ++ + HG+ +++ P + A DS A
Sbjct: 481 LLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQSAPDSGQA 537
>AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ32227 fis, clone PLACE6004396. ).
Length = 541
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 528 LLPDHVSMLLLM--IVALDHKLNILVECPHQLNLLHGKPIPVIENPFHRQAQDSSMA 364
LL D +S +L ++ALD +L ++ + HG+ +++ P + A DS A
Sbjct: 481 LLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQSAPDSGQA 537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,326,756
Number of Sequences: 237096
Number of extensions: 2106736
Number of successful extensions: 4720
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4717
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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