Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H23
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   6.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 450 DTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELPG 557
           +TPQ+ +  G GP+  +R+L  G+ V    V +LPG
Sbjct: 325 NTPQLLMLSGIGPKEHLRSL--GIPV----VVDLPG 354


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +1

Query: 304 NRSLVQLCL*KKEI---HSSLLHGH*GILCLSMKWIL 405
           N SLV L   KK+    H+S+L G    LC+S+ +I+
Sbjct: 377 NTSLVSLD--KKQYTWRHTSVLIGWSAFLCISLVYII 411


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 444 GEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELP 554
           G + P+V L+ G    + +  L HG   A    S+ P
Sbjct: 629 GLEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRP 665


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 444 GEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELP 554
           G + P+V L+ G    + +  L HG   A    S+ P
Sbjct: 629 GLEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRP 665


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 444 GEDTPQVYLACGRGPRSSIRALRHGLEVAEMAVSELP 554
           G + P+V L+ G    + +  L HG   A    S+ P
Sbjct: 629 GLEPPRVILSSGAKSPTVLEELTHGTLAASTLYSKRP 665


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 477  GRGPRSSIRALRHGLEVAE 533
            GR  RSS+R L   + VAE
Sbjct: 1842 GRSSRSSLRTLLPPISVAE 1860


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 477  GRGPRSSIRALRHGLEVAE 533
            GR  RSS+R L   + VAE
Sbjct: 1838 GRSSRSSLRTLLPPISVAE 1856


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 365 AIEESCACR*NGFSITGIGLPCSRFS 442
           A +E+C C  +  SIT  GL   R S
Sbjct: 326 AFKETCRCSPSNPSITRTGLSSVRDS 351


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 67   PHTKQNPCFSFWHKLSKETYLK*QLKLMKIW 159
            P T   P   FWH    E   +  L+  K+W
Sbjct: 973  PGTGIAPFRGFWHHRLAEIKRRPDLEYGKVW 1003


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,796
Number of Sequences: 438
Number of extensions: 3781
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)